Gene Ksed_23380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23380 
Symbol 
ID8373841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2428064 
End bp2428795 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID644992572 
Productputative intracellular protease/amidase 
Protein accessionYP_003150078 
Protein GI256826118 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.254524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCG TCCTGATGGT GCTGTCAGCG GCCACTCACT GGACCCTGTC CGACGACTCG 
CGTCACCCGA CGGGGGTGTG GGCCGAGGAG TTCATCTCCC CCCACGACGT GTTCACAGAG
GCCGGCTGGA AGATCACCGT GGCGACTCCC GGTGGGCGGC CGGCGGTCAT CGACCCGGCC
AGCCTCGGCA CGGCGGGCGG GCTGTTCCCC CGCACCAACG GCTTCCAGGA CTGCGTGGAC
CGGCTCTCAC CGTTGCTGCG CAAGCCGCTG AACCTGTACG GGCTCGACCT GGCTGACCAC
GACCTGGTCT TCTACCCCGG TGGGTACGGG TCGATGGAGG ACTTGGCCCA GGACGCGGTC
GCGGGGGCGA TGCTGTCCGA GCGTGTGGCC ACCGGGGGGC CGGTGGCCTT CTCCTGCCAC
GGGGCGGCCG CGGCCCTGGG GGCTACAGCG TGCATGGACA TCTCGCCCTT CCGGGGACGG
GTGATGACGG CCTTCTCGAA CGCCGAGGAG CGCTTGACCC GCATCGCGCC CCGGGTGCCG
TGGATGCTCG AGGACCGCCT GCGTGCCGCG GGGGTGGAGT ACAGCCGCGC GATCCTGCCG
TTCCGGCCGC ACGTGGTGGC CGACCGCACC GTCTACTCCG GGCAGAACCC GCAGTCCTCC
GGCCACCTGG CGCGGCGGGT CGTGGCCGAC CTGAGTGCCC AGTCACCCTC CCGGGTGGCC
GTGCGGCACT GA
 
Protein sequence
MISVLMVLSA ATHWTLSDDS RHPTGVWAEE FISPHDVFTE AGWKITVATP GGRPAVIDPA 
SLGTAGGLFP RTNGFQDCVD RLSPLLRKPL NLYGLDLADH DLVFYPGGYG SMEDLAQDAV
AGAMLSERVA TGGPVAFSCH GAAAALGATA CMDISPFRGR VMTAFSNAEE RLTRIAPRVP
WMLEDRLRAA GVEYSRAILP FRPHVVADRT VYSGQNPQSS GHLARRVVAD LSAQSPSRVA
VRH