Gene Ksed_23360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23360 
Symbol 
ID8373839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2425498 
End bp2427333 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content74% 
IMG OID644992570 
Productpredicted membrane protein 
Protein accessionYP_003150076 
Protein GI256826116 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGC CGATGAACTG GCGCGCGCCG CAGGAGGAGC CCCATGCGGG GGAGCGCACC 
CTGGGTGCGC AGGAGCCCAC CGGCGCCGAT GCGGGGGAGC ACGGCCCCGC CGGGACGCTC
ACCGCATCGG ACCTGCCGCC CACGGGCGGG CACCCGGGTG ACCAGCCGCC GGCCGACGGC
GACTGGAAGC GCCAGAACCC GCGGATGTTC CTGGTCTACC CGTTCAAGGC GCTGGGCTCC
CTGCTCCCGC TGCTGCTCGT GCTGCTGTTC ACCCAGCGCG GGGACGGCCT GTTCCAGCTG
TTCAGCGCCG GTGTCGCCGG TGTGATCGCC GTCGTGGTGT CGCTGGTGCA GTACTTCACG
CTGCGCTACC GCGTCGGGGC CGAGACGGTC CAGGTGCGTC GGGGACTGTT CACCAAGGAG
ACCAAGACCG CGCGCCTGGA GCGGGTGCGC TCGATCGACG TGGAGGGCAA CCTCCTGATG
CGCCTGCTCG ACCTGCGCAC CATCACGATC GGCACCGGGG TGGACGACGG GCAGGTGGAG
CTCGAGGGCA TCCGCACCCG CGACGCCGAG GAGCTGCGCG AGGGGTTGCT GCGCCGCTCG
CGCGAGGTCC GCGCCGAGCG CGGGATCGAT GCGGGGGCGC AGCCCGGCGT GGCGCAGCCC
GGCGTGGCGC CGGCCGGCGT GACGTCCGGC GGTGCGTTCC CCGCGGGTGA TGAGGGGGCC
CTGGACGGGC GCGACGGCCC GGTCGTGATC GGGAACGGCG CGCCGCACGA GCCACCGGCG
TCGGAGGTGC CCGAGCAGAG CCTGGTCCGC TGGGACAACC GGTGGCTGCG CTTCGGCCCC
CTGGGGGCCA GCGGGCTCGT GGTGGCCGGT GTGGTGGCCG GTGGTGGGGC GCAGTTCGCC
GACGACATCG CGCGCTCGGA CCTCGGCCAG CGCATCGGTG GGCAGCTGGT GCACCAGCTG
CAGGAGCTGG GCGTGCTCGC CAGCATCGCT GCGCTGCTCG CGGCCGGCGC GGTGTTCTCG
CTGCTGTTCT CGCTGGCGGC CTACGCGCTG GGCTGGTGGG GCCTGGACGT GACCCGCTCG
GGCCACGGCA CCCTGCACGT GCGCCGGGGT CTGACCACCA CCCGCTCGGC CACGATGGAG
GAGCGCAAGG TGCGCGGCGT GATGGTCACC GAGCCGTGGC AGCAGCGTTG GCAGAAGGGG
GCCTCGCTGA GCGCGATCGT GACTGGCGCC GAGGGCGGCA GTGTGGAGGT GCTGCCGACC
GTGCCGCGCG ACACCGCGCG CGAGGTCGCG GTGGACGTGC TCTCCAGCGG GGAGGACCGT
CCGGCACCGG TGGGTCTGTT CGGCATGGAG CTGGTCTCGC ACGGCCCGCG GGCCCTGCGG
CGGATGACCG TCTCGGCCCT GCTGACCACC TTCTGGTTCG GTCTCCTGCC GGCGGCCGTG
GCCGTGGCGG TGCTGCGTCA CTTCGACGTG ACCGACGGGC TGCTGGACCG CGGCTGGTGG
TGGCTGTTCG CGTGGACGGC GTTCATCGCG GTGGTGAACT TGGTGCCGGT CTACCCGGCC
TGGCGCTCGC TGGGGCACGC GGTCACCGAG CACCACGTGG TCTTCCGGCA GGGCGCGATC
CTGCGCAACC ACCTGGCGCT GGAGACCGAC GGCATCCTGA GCTGGAACAT GGCGCAGTCG
TTCTTCCAAC GGCGGTTGGA GTTGTGCACG CTGACCGCGA CCGTGGCCGG CGGCGCCGAG
GGCTACGAGC TGCCCAACGT GCCGGTCGAG GACGCGGTGC GGCTGATGCG GTCCGCCTCG
CCGGAGCTGC TGTGGCAGTT CAGCCGCGCC GCCTGA
 
Protein sequence
MSTPMNWRAP QEEPHAGERT LGAQEPTGAD AGEHGPAGTL TASDLPPTGG HPGDQPPADG 
DWKRQNPRMF LVYPFKALGS LLPLLLVLLF TQRGDGLFQL FSAGVAGVIA VVVSLVQYFT
LRYRVGAETV QVRRGLFTKE TKTARLERVR SIDVEGNLLM RLLDLRTITI GTGVDDGQVE
LEGIRTRDAE ELREGLLRRS REVRAERGID AGAQPGVAQP GVAPAGVTSG GAFPAGDEGA
LDGRDGPVVI GNGAPHEPPA SEVPEQSLVR WDNRWLRFGP LGASGLVVAG VVAGGGAQFA
DDIARSDLGQ RIGGQLVHQL QELGVLASIA ALLAAGAVFS LLFSLAAYAL GWWGLDVTRS
GHGTLHVRRG LTTTRSATME ERKVRGVMVT EPWQQRWQKG ASLSAIVTGA EGGSVEVLPT
VPRDTAREVA VDVLSSGEDR PAPVGLFGME LVSHGPRALR RMTVSALLTT FWFGLLPAAV
AVAVLRHFDV TDGLLDRGWW WLFAWTAFIA VVNLVPVYPA WRSLGHAVTE HHVVFRQGAI
LRNHLALETD GILSWNMAQS FFQRRLELCT LTATVAGGAE GYELPNVPVE DAVRLMRSAS
PELLWQFSRA A