Gene Ksed_23230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23230 
Symbol 
ID8373826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2410541 
End bp2411788 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content77% 
IMG OID644992557 
ProductFlavin containing amine oxidoreductase 
Protein accessionYP_003150063 
Protein GI256826103 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.807494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCG ACGTGATCGT CATCGGGGCG GGACTGGCCG GACTGACCGC AGCACGACAC 
CTGGAGGCCG CCGGGCAGCG GGTGCAGGTG CTGGAGGCAG GCGCGGAGGT GGGCGGACGC
GTCGCCACCG ACCGCGTGGA CGGCTTCCTG TGCGACCGCG GGTTCCAGGT GCTGAACCCT
GCCTATCCGC GGGTCCGCCG GGAGGTCGAC CTCGACGCGC TCGACCTGCA GACCTTCACC
CCCGGGGTGG ACCTGGTGAG CCCCGAGGGG GTGGCGCGCC TGGCCGACCC GGTCCGCTCC
CCGGGTGACC TCCCCGCGAC CCTCCGCTCC GGCATCGTCC CCACCGACGC CACCGCACTG
CGTCAGCTCA CGGGCCTTGC CCGGTGGGTG CTGCCCGCGC TGGCGTCCCC GGGCGGCCAG
AGCGAGGTGC CGTGGGGCGA GCGCCTCGAT GCGGTGGGCG CCGGCGGCCT CGGCCGGCGC
GCGCTCGAGC GCTTCCTGGC CGGTGTGCTG TTGGAAGAGG ACGGCTCCAC GAGTGCTCCT
GCCGTGGCGC AGCTGCTGCG GTGGTTCCTC CTTGGCACCC CGGGCCTGCC CGCGGCGGGG
ATGGGGGCGT TGCCCGCCCA GCTGGCCGGT GGCCTGCGGC AACCCGTGGC CCTGGGACAG
GCGGCGCACC GGGTGGTGGC ACGCGACGGC GCGCTGGCCG TGGAGACCGC CGATGGCACG
CACGTCGCCC GCCAGGTGGT CGTCACCGTG GCGCCGCAGC AGGTGCAGGG ACTGCTCGGC
CCGGACGGCC CCGTCCTGCC GGTGGCCCGC ATGAAGGGCG TGACCACGTG GTGGTTCACC
GCCCCCGAGC CGCCCACCGC CGACCCAGTG TTGCGCGTCG ACGGAACGGC GCGGCGCGGC
CCCGTCGTCA ACACGGCCGT CGTCACCGCT GCCGCGCCCA GCTACAGCGC GACGGGGGCT
CCCCTCATGG AGGCCAGCGT GCTGCACCGC GGCGAGGGGC CGGTCGACGA GGCGGGAGTC
CGCGAGCACC TGTCGGTGCT GTGGGGCCGG CCCGTCGACG GCTGGGAGGT GGTGACGCGC
CACGACGTGC CCGACGCCCT GCCCGATGCG GCCCCCGGGG CGGGCACCCC ACGCGACCCG
GCCCTCGGTG GTGGGCTGTT CCTGGGTGGT GACCACTGGG GAGGGGCCTC CATCCAGGGC
GCGATGCAGT CCGGCGCCCG CGCGGCGGAG GCGGCGCTGC GGGCGTAG
 
Protein sequence
MDVDVIVIGA GLAGLTAARH LEAAGQRVQV LEAGAEVGGR VATDRVDGFL CDRGFQVLNP 
AYPRVRREVD LDALDLQTFT PGVDLVSPEG VARLADPVRS PGDLPATLRS GIVPTDATAL
RQLTGLARWV LPALASPGGQ SEVPWGERLD AVGAGGLGRR ALERFLAGVL LEEDGSTSAP
AVAQLLRWFL LGTPGLPAAG MGALPAQLAG GLRQPVALGQ AAHRVVARDG ALAVETADGT
HVARQVVVTV APQQVQGLLG PDGPVLPVAR MKGVTTWWFT APEPPTADPV LRVDGTARRG
PVVNTAVVTA AAPSYSATGA PLMEASVLHR GEGPVDEAGV REHLSVLWGR PVDGWEVVTR
HDVPDALPDA APGAGTPRDP ALGGGLFLGG DHWGGASIQG AMQSGARAAE AALRA