Gene Ksed_23030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23030 
Symbol 
ID8373806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2389416 
End bp2390141 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content68% 
IMG OID644992538 
Producthypothetical protein 
Protein accessionYP_003150044 
Protein GI256826084 
COG category[S] Function unknown 
COG ID[COG4849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.340517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0165029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGGACT TCGTCCTCGT CGGTGCGCTG GCGCGGGATC TTCAGGTGCT CGGGCGTGCG 
GGTGGTCAGG CCGTCAGGGC CACTCATGAT GTCGACATCA CGGTCTACGC GCCCTCGGGT
GACGCCCTGC GGGACCGGAT GAGTGCCCTG CGGTCCACGG GGAGCCGGCA GGTCTTCTAC
TTCGGAGACC TCCAGGTCGA CGTGCTGGCG CGGGGACCGA TCGCGCCTGG CGGCGTCTTC
ACGGTCTCAG AGGGCGTGAC CTGTGACGTG ACGGGCATGG AGGAAGCAGC CCGAGGAGCC
GAGAGGATGC GTCTGGGTGA GGACAGCGTG GTGGAGGTGC CAACCCTGGC GTCCCTCGTG
GGCCTGAAAC TGGTGGCGTG GGACGTGAGG CGCACTTTCA CGGCCAAGGA CGCGCAGGAC
CTCGCCGCGC TGCTCGACTC GTCCCACCGG GGAGAGTTCG AGGACGCGTG CTGGAAGGAC
AGCCAACAGG CCTCGCGCCA CGACTTCGAC CCGTCGATGG TGGGGCCGGC ACTGGTGGGC
GCTGAACTGG CATCGACCTG GGAGTCGTCG ACGCTTGAGC GGCTACGGGG GGTGATGGAG
GAAGGGCGAG ACGAACTGGT GGGCGCCTGT GTGCGCTGGG CGCCGGCGAC ACAACCCATC
GGGCAGCAAC TCGACGTCCT GCACCAGGAA CTCAGCCACG CAACGCCTGC CTCAGGCACA
CGATAG
 
Protein sequence
MGDFVLVGAL ARDLQVLGRA GGQAVRATHD VDITVYAPSG DALRDRMSAL RSTGSRQVFY 
FGDLQVDVLA RGPIAPGGVF TVSEGVTCDV TGMEEAARGA ERMRLGEDSV VEVPTLASLV
GLKLVAWDVR RTFTAKDAQD LAALLDSSHR GEFEDACWKD SQQASRHDFD PSMVGPALVG
AELASTWESS TLERLRGVME EGRDELVGAC VRWAPATQPI GQQLDVLHQE LSHATPASGT
R