Gene Ksed_22990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22990 
Symbol 
ID8373802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand- 
Start bp2385703 
End bp2386374 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content76% 
IMG OID644992534 
Producttranscriptional regulator 
Protein accessionYP_003150040 
Protein GI256826080 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.0933864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.028216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGAC GTTCCCGCAC CGAGATGGAG GCCGCGATCC TGTGCGCCGG CCGCCGCCAG 
CTGCAGCAGA AGGGGGCCGC GGCGCTCTCG TTGCGGGAGG TGGCCCGCGA GGTGGGGGTG 
GTGAGCTCAG CGGTGTACCG CTACGTCTCC AGCCGGGACG AGCTGCTCAC CCGGCTGCTG 
GTGGCCGCCT ACGACGGGTT GGCCGATGCG GTGGATGCCG CCCTGGGCCG CGCCGACTCC 
CGCCAGGCGC TGGCCGTGAT CGCCCGTGCC GTGCGCGCGT GGGCGGTGGA GCACCCGGAG 
GAGTGGGGGC TGATCTACGG CACGCCGGTG CCCGGGTACG CCGCGCCGCA GGAGCGCACG 
GGTGGGCCGG GGACGCGTGT GCTGGCGCTG GTGCTGCAGG CCGTGGTCGA TGCGGGGAGC 
GGCCGCCCGG GTGCCGGGCG CGGGGCCGAG GCGGCGGGCC CCTTGGCGGG GTTCGCGGCC 
GAGGCTGCGG AGGTGCTCGA CGTGCCCGCG TCATCGGAGC AGGTGGCTGC GGCCATGGGC 
TGGTGGGCCG GCCTGGTGGG GCTGGTGCAC GCGGAGGTGT TCGGCTTCTG GGGGCCGGTC 
CCGGAGGGGC TGGGGGAGGA GTTGATGGAG CACTGGCTGT GCGGGCCGGG GGACGTGGGC 
GTGTCGGGGT AG
 
Protein sequence
MARRSRTEME AAILCAGRRQ LQQKGAAALS LREVAREVGV VSSAVYRYVS SRDELLTRLL 
VAAYDGLADA VDAALGRADS RQALAVIARA VRAWAVEHPE EWGLIYGTPV PGYAAPQERT 
GGPGTRVLAL VLQAVVDAGS GRPGAGRGAE AAGPLAGFAA EAAEVLDVPA SSEQVAAAMG 
WWAGLVGLVH AEVFGFWGPV PEGLGEELME HWLCGPGDVG VSG