Gene Ksed_22880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22880 
Symbol 
ID8373791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2371098 
End bp2372186 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID644992524 
Producthypothetical protein 
Protein accessionYP_003150030 
Protein GI256826070 
COG category[S] Function unknown 
COG ID[COG3535] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.602917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCA CGACCGACCA CGTCCCCGAC CTGGCCCGCG GGGCCGCCCT GCTCGGCACC 
GGTGGCGGGG GAGACCCGCA CATCGGCGCG CTGTTGGCCC GCCAAGCGCT CGTTGAGCAC
GGCCCGATCG CGGTCGAACC GCTCGGTTCG ATCCCCAACG ACGCCTTGGT CCTTTCGGTC
GCGATGATGG GCGCCCCGAC CGTCATGGTG GAGAAGCTCC CCGGTCTGAC CGAGATCGTC
GCCCCGGTCC GGGCCGTGGA GAAGCACCTC GGCCGCCAGG TGACCCACCT TCTGTGCGCG
GAGGTCGGCG GGGTGAACTC GACCGTCCCG GTAGCGGCCG CAGCTGCTCT CGGCCTCCCG
CTGCTGGACG CGGACGGAAT GGGTCGTGCT TTCCCCGAAC TCCAGATGGT GCTGCCCACC
CTCTACGGCA TCTCGGCCTC ACCCATCGGG TTCGCGGACG AGAAGGGCAA TAGTGGGGTG
CTCGATACCG TGGACAACCG CTGGACCGAG CGCATCGCCC GCGTGGCCTG CGTCGAGATG
GGCTGCTCGA TCATGATCGC CACGTTCGCC ATGACCGGGG AGCAGGCACG GGAGTCCTTG
GTTGATGCCT CCTTGAGCCG TTGCCTGGAG CTCGGCCGTG GTCTTCGTGA CGCCCGGGAC
GAGAAGGTCG ACCCCGTCGA GGTCGTCACC CGCATGCTCG GTGGGCGCGA GATCGGCGGC
GGCAAGGTCG CCGACGTGCA GCGAGCCACC ACGACCGGCT TCGCCCGTGG CCAGGCTCGC
ATCACCTCAG AGGGCGGGGA GTTGACACTC TCGTTCCAGA ACGAGCACCT CGTCGCCTCC
CATGAGGGCC AGACCCTCGT GACCACCCCG GACCTCATCA TGGTGCTCGA GGCCGAGTCC
GGCGAGCCGA TCACCACCGA GGGCCTGCGC TACGGCCAGC GGGTGCGGGT CGTCGCCGCG
CCCTCGGACG AGCGCTGGCA CTCGCCGGAG GGCCTCGCGC TCGCCGGCCC CGACTACTTC
GGCTATGACA CCCCGGCGCA CCGCTACGAC GGCAGCACCG GGCTGGCCGG GACGGAGCAC
TCCGCATGA
 
Protein sequence
MQITTDHVPD LARGAALLGT GGGGDPHIGA LLARQALVEH GPIAVEPLGS IPNDALVLSV 
AMMGAPTVMV EKLPGLTEIV APVRAVEKHL GRQVTHLLCA EVGGVNSTVP VAAAAALGLP
LLDADGMGRA FPELQMVLPT LYGISASPIG FADEKGNSGV LDTVDNRWTE RIARVACVEM
GCSIMIATFA MTGEQARESL VDASLSRCLE LGRGLRDARD EKVDPVEVVT RMLGGREIGG
GKVADVQRAT TTGFARGQAR ITSEGGELTL SFQNEHLVAS HEGQTLVTTP DLIMVLEAES
GEPITTEGLR YGQRVRVVAA PSDERWHSPE GLALAGPDYF GYDTPAHRYD GSTGLAGTEH
SA