Gene Ksed_22800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22800 
Symbol 
ID8373783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2358688 
End bp2360622 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content67% 
IMG OID644992516 
Producttype I restriction-modification system methyltransferase subunit 
Protein accessionYP_003150022 
Protein GI256826062 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.386245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCC AAGGCTTCGA GGACAAGGTC GCCTTCGTCT GGCGCATCGC CGACCGCCTC 
CGCGGCACCT TCAAGCAGCA CGAGTACGGC TCAGTGATGC TCCCCCTGCT GGTCCTGCGC
CGCATGGACG CCGCCCTGGC CGACACCAAG GCCGAGGTGG TCGCCCAGGC CAAGGGGTGG
GACACCATCG GCCCCGGCCA GGACAAGCTG CTCAAGCGCA CCAGTCGCCG CCCGTTCTAC
AACACCTCCC CGCTGACCTT CGCCGGCCTG CTCAACGACG CAGACAACCT GCGCGAGAAC
CTCGCCAAGT ACATCCGCCA CCTCTCCCCC GAGGCGGCCC GCGTCATCGA GGCCTACGAC
TTCGACCCCA AGATCGAACG GATGGACCGC GACGACATCC TCTACGGGGT CATCGCCGAC
TTCGCCGACC TGGACCTTCG CACCTCCGTG GTGAGCAACG AGGCGATGGG GTACATCTTC
GAGGAGCTGC TCCGGAAGTT CTCGGAAATG TCCAACGAGA CCGCCGGTGA GCACTACACC
CCGCGCGAGG TCATCTCCCT GATGGTGCAG CTGCTCCTCA CGGGTAAGAC CCACACCGAG
CTGATGGAGA ACCCCCGGCC CGTCCGCACC GTCTACGACC CCGCGGCCGG CACCGGCGGC
ATGCTCGTGG GCGCCCTGGA CGGCGTCCAG GGCCTGAACG GCAACGCCAC GGTCACTGTC
AGCGGCCAGG AGCTCAACGA CGAGACCTGG GCCATCGCCC AGTCCGACCT GATGATGCTC
GGCATCGGCC CGGAGCGGAT GGCGCGCGGC AACTCCCTGA CGCAGGACGC CTTCCCCACC
GAGCAGTTCG ACTTCATGCT CGCCAACCCG CCCTACGGCG TGGACTGGAA GAAGTACGCC
GGCCCCATCA AGGACGAGGC CGAGAACCTG GGCTTCAGCG GCCGATTCGG CGCGGGCACC
CCGAGGGTTT CCGACGGTTC CTTCCTGTTC CTGCAGCACA TGATCAGCAA GATGAAGCCG
GGCGGCTCCC GCATCGGCAT CGTGCTCTCG GGGTCGCCGC TGTTCTCCGG TCAGGCCGGT
AGCGGCGAGT CGGAGATCCG CGGCTGGATC CTGGAGAACG ACTGGCTGGA GGGCATCGTC
GCCCTGCCGG ACCAGATGTT CTACAACACA GGCATCAGCA CCTACGTGTG GATCCTGACC
AACGACAAGG ACGGGGCCAG CCGCGGCAAG GTGCGCCTCA TTGACGCCCG CGAGATGGGC
ACCAAGATGC GCAAGTCCCT GGGCGACAAG CGCAAGGAGC TCAAGCCTGA GGCCATCCGT
GAGATCACGA ACCTCTACGG CGGCGCCCTG GATGAGTTCG CCGACGACCC CCGCGTACGT
GTGATGAACC GAAACGACTT CGGCTACCAG CGCATCACCG TGGAGCGCCC CATGCGCCGG
CACTGGGAGG TCACCTCGGA GCTCGCGGAG GCCCACGAGG GCATCGGCCA CCTGGTGGGG
CGCCGCTTCG AGACCGAGAA GGCCCTGTCC AACGAGTTGG CGGATCTGGA CACCAAGGAG
CGCAAGGCCG TGCTCAAGGG GGCCGCCATC GCCGATGAGG AGGCGCCGGT CATCCTCAAG
AAGGGCGAGC CCGCACCGGA CCCGGACCTG CGCGATGCGG AGAACATCCC CCTACCGGAC
GGGTGGATGG ACCTGCCGGA GAACCGGCGC TTCTCCACCC TGGACGAGGC CGCCGAGAAG
CACCTGCACA CCGAGATCCA CCCCTACGTG CCGGACGCGT GGCTGGACTA CAGCAAGACC
AAGGTGGGCT ACGAGATCCC GTTCACCCGC CAGTTCTACG TGTACGAGCC GCCACGCCCC
GTGGACGAGA TCGCCGCCGA GATCAAGGAG CTCGAGGAGC AGATCCAGGG CTGGATGAAG
GGACTGGGGC TGTGA
 
Protein sequence
MAPQGFEDKV AFVWRIADRL RGTFKQHEYG SVMLPLLVLR RMDAALADTK AEVVAQAKGW 
DTIGPGQDKL LKRTSRRPFY NTSPLTFAGL LNDADNLREN LAKYIRHLSP EAARVIEAYD
FDPKIERMDR DDILYGVIAD FADLDLRTSV VSNEAMGYIF EELLRKFSEM SNETAGEHYT
PREVISLMVQ LLLTGKTHTE LMENPRPVRT VYDPAAGTGG MLVGALDGVQ GLNGNATVTV
SGQELNDETW AIAQSDLMML GIGPERMARG NSLTQDAFPT EQFDFMLANP PYGVDWKKYA
GPIKDEAENL GFSGRFGAGT PRVSDGSFLF LQHMISKMKP GGSRIGIVLS GSPLFSGQAG
SGESEIRGWI LENDWLEGIV ALPDQMFYNT GISTYVWILT NDKDGASRGK VRLIDAREMG
TKMRKSLGDK RKELKPEAIR EITNLYGGAL DEFADDPRVR VMNRNDFGYQ RITVERPMRR
HWEVTSELAE AHEGIGHLVG RRFETEKALS NELADLDTKE RKAVLKGAAI ADEEAPVILK
KGEPAPDPDL RDAENIPLPD GWMDLPENRR FSTLDEAAEK HLHTEIHPYV PDAWLDYSKT
KVGYEIPFTR QFYVYEPPRP VDEIAAEIKE LEEQIQGWMK GLGL