Gene Ksed_22680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22680 
Symbol 
ID8373771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2347310 
End bp2348245 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content69% 
IMG OID644992506 
Producttransposase family protein 
Protein accessionYP_003150012 
Protein GI256826052 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.971541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGCG TCGCCGAGGG GCTCGCGGTC TCGTGGAACA CCGCCAACGA CGCCGTCCTG 
GCCGAAGGTC AACGGCTGCT GATCGACCGC CCGTCCCGCT TGGACGGGGT GAACGCGGTC
GGGGTCGACG AGCACGTGTG GCGGCACACC AGGAAGGGCG ACAAGTACGT CACCGTCATC
ATCGACCTCA CCCCGGTCCG GGACGGTACC GGGCCCTCCC GCCTGCTGGA CGTGGTCGAG
GGCCACAGCA AGAAGGCGTT CAAGGACTGG CTCGCGCAGC GGGACCAGGC CTGGCGCGAC
GGGATCGAGG TCGTCGCCAT GGACGGGTTC GCCGGGTTCA AGACCGCCAC CACCGAGGAA
CTGCCGGACG CGGTCACTGT CATGGACCCG TTCCACGTCA TCCGGTTGGC TGGCGACGCC
CTGGATGAGT GCCGCCGCCG CGTTCAGCAG GAGTTGCACG GGCACCGCGG CCGCAAGGAC
GACCCGCTCT ACTCGGCGCG CCGGACCCTG CACACCGGCG CCGACCTGCT CACCGACCGT
CAACACGAGC GCCTCGACAA GCTGTTCACC GGGGACCGGC ACGTCCAGGT CGAGTGCACC
TGGGGCATCT ACCAGCGCAT GATCTCCGCC TACCGAGACC CCAACCGGGT CACCGGCCGC
GTCGAGATGA GCTCGGTGAT CGATGCCCTC GCCGACGGGG TGCCCCGACC GCTGGTCGAG
CTGCGCAAGC TCGGCCGCAC CCTGGCCAGA CGCGTCTGCG ATGTCCTGGC CTACTTCGAG
CGACCCCGCA CCAGCAACGG ACCTACCGAG GCCGTGAATG GACGACTTGA GCATCTTCGC
GGGCTGGCCC TCGGGTTCCG CAACCTCACC CACTACATCG CCCGAGCACT CCTCGAAGCT
GGCGGATTCA GGCCCCGACT ACACCCTCGT TTGTGA
 
Protein sequence
MARVAEGLAV SWNTANDAVL AEGQRLLIDR PSRLDGVNAV GVDEHVWRHT RKGDKYVTVI 
IDLTPVRDGT GPSRLLDVVE GHSKKAFKDW LAQRDQAWRD GIEVVAMDGF AGFKTATTEE
LPDAVTVMDP FHVIRLAGDA LDECRRRVQQ ELHGHRGRKD DPLYSARRTL HTGADLLTDR
QHERLDKLFT GDRHVQVECT WGIYQRMISA YRDPNRVTGR VEMSSVIDAL ADGVPRPLVE
LRKLGRTLAR RVCDVLAYFE RPRTSNGPTE AVNGRLEHLR GLALGFRNLT HYIARALLEA
GGFRPRLHPR L