Gene Ksed_22550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22550 
Symbol 
ID8373758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2336206 
End bp2337759 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content70% 
IMG OID644992494 
Productanion transporter 
Protein accessionYP_003150000 
Protein GI256826040 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG ACACCACGCA CGAGGCAGAA GCCGGCACCA CCCGGACCAC GCGGGAGGAC 
CCGACGGCCC ACCACCAGAT GGTGGACTCG GACGGCGGTC GCCCGGAGTG GATCTCCTGG
GTCGGTCTGG GCGCCGGGCT GCTGGCCGCC CTGGTGGTCT ACCTCCTCAT CCCCGCCGAG
GTGGGCCACC ACGCCCGCCT CACCGGGGCC GTCGCGGTGC TCATGGGCAT TTGGTGGATG
ACCGAGGCCC TGCCCATCCC CGCCACGGCG CTGCTGCCCC TCATCGTGTT CCCGGCCCTG
GCCGACCAGC CGTTCAACAG CATCGGCGGC AGCTACGGCA ACTCCATCAT CTTCCTGTTC
ATGGGCGGGT TCATGCTCGC CCTGGCCATG CAGCGCTGGA ACCTGCACCG CCGCATCGCG
CTGGTCACGG TGCGCGCCAT GGGTACCAAG CCGGCCATGG TGATCGCCGG GTTCATGCTC
GCCACCGGGT TCCTGTCCAT GTGGGTGTCC AACACTGCCA CCGCCGTCAT GATGATGCCG
ATTGGCCTGT CCGTGCTCGG CCTGGTGGCC ACCCAGATGA CCGGCGACGA GGACGCCGAG
GGCGGGGACA TCATCCGCAC CAACTTCGGC ACTGCCCTGA TGCTGGGCAT CGCCTACGCC
GCCTCCATCG GGTCGCTGGC CACGATCATC GGCACCCCGC CCAACACGCT CCTGGCCGGC
TACATGGCCG ATGCGCACGA CGTCACCATC GGTTTCGGAC AGTGGATGCT GGTGGGCCTA
CCGCTGGCCG TGGTGATGCT GGTGGTGTGC TGGGTCCTGC TCACCAAGGT GGTGTTCAAG
CCCGAGGTCG AGGAGATCCC CGGCGGCCGG GAGATGCTCG ACCGGGAGGT GGGGAAGCTC
GGGCGCATGG GCTCGGGGGA GACCCGGGTG CTGATCATTT TCGTCGCCGC CGCCCTGGCT
TGGGTGGCGC TGCCGCTGCT CATGGACGAG CCCCCGGTGA GCGACTCCGG CATCGCCATG
ATCGTCGCCC TGCTGCTGTT CCTGCTGCCG GGCGTCGGCC TCACCGGGGA GCGCCTGCTG
GACTGGGACA CCGCCCAGGA GCTGCCCTGG GGAGTGCTGC TGCTGTTCGG TGGCGGGCTG
GCGCTCAGCA GCCAGTTCAG CGCCAGCGGG CTCACCGAGT GGATCGGTGA GAGCGTCTCC
GGCCTGCAGG TGGCGGCGGT GGTGATGGTG GCGCTGGCCG CGGCCGGCAC CATCTTCCTC
ACCGAGATCA CCAGCAACAC CGCCACCGCG GCGGCCTTCC TGCCGGTGGC CGGTGGCGTG
GCCGTCGGGG TGGGCATGGA CCCGCTGATG CTGGCCGCCC CTGTCGCGCT GGCGGCCACC
TGTGCGTTCA TGCTGCCGGT GGCCACCCCG CCCAACGCGA TCGCCTACGG CTCGGGGTAC
GTCCGCATCG GCGACATGGT CAAGGGCGGG CTGTGGCTGA ACCTCATCGG CATCGTGCTG
GTGACGCTCG TCTCGATGAC GCTGCTCGCT TGGGTGTTCG GGGTGAGCGC CTGA
 
Protein sequence
MTRDTTHEAE AGTTRTTRED PTAHHQMVDS DGGRPEWISW VGLGAGLLAA LVVYLLIPAE 
VGHHARLTGA VAVLMGIWWM TEALPIPATA LLPLIVFPAL ADQPFNSIGG SYGNSIIFLF
MGGFMLALAM QRWNLHRRIA LVTVRAMGTK PAMVIAGFML ATGFLSMWVS NTATAVMMMP
IGLSVLGLVA TQMTGDEDAE GGDIIRTNFG TALMLGIAYA ASIGSLATII GTPPNTLLAG
YMADAHDVTI GFGQWMLVGL PLAVVMLVVC WVLLTKVVFK PEVEEIPGGR EMLDREVGKL
GRMGSGETRV LIIFVAAALA WVALPLLMDE PPVSDSGIAM IVALLLFLLP GVGLTGERLL
DWDTAQELPW GVLLLFGGGL ALSSQFSASG LTEWIGESVS GLQVAAVVMV ALAAAGTIFL
TEITSNTATA AAFLPVAGGV AVGVGMDPLM LAAPVALAAT CAFMLPVATP PNAIAYGSGY
VRIGDMVKGG LWLNLIGIVL VTLVSMTLLA WVFGVSA