Gene Ksed_22110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22110 
Symbol 
ID8373714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2288926 
End bp2290128 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content72% 
IMG OID644992453 
Productpredicted metal-dependent membrane protease 
Protein accessionYP_003149959 
Protein GI256825999 
COG category[R] General function prediction only 
COG ID[COG1266] Predicted metal-dependent membrane protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.149179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGTGA GCCACACTCC GGATTCCTGG AACCAGCAGC GCCCGCAGCC CCCCGAGCCC 
CACGGCCCCG GGCAGCCGCA GGCACCGCAG CAGCCTCCCC ACGACCCCTA CGCCCCGCGG
CCCGAGCCGC AGTACGGCCA GTACGCGCCG CAGGGCCACG GACCGCAGGG CGGCCAGTTC
GGCCCGCCGC CGCAGGGCCA CGGACCGCAG GGCGGCCAGT ACGGCCCGCC GCCGCAGGGC
TACGGTCCCC CGCCGGCTCC GGCCTCCTCC GTGCGGCCGA ACGCCGAGTT CCACGAGCTC
ACCCGCGGTC CGCGCTGGTC GTGGTGGCGT CCGCTGGCCG CGTTGGGTCT GTGGATCCCG
CTGGGTCTGG CGGTCATCGT CGTGATGGTG GTGAGCCTGG TGATCCCGCT GGTCGCCTAC
CCCGACCAGA TGGACATCTT CGAGCCCGGC GGCACCGGCG AGACCCCGAC CATGCAACCC
CTGACCTTCC TGGGCATGAA CCTCGGTCTG GCGGTGCTGA TCCCCGCGAC GATCGCGGTG
ATCGCGCTGG CCTACTGGGT GCGCCCCGGC TTCGCCTCGT CGGTGGCGGG ACGCTTCCGC
TGGGGGTGGG CGCTGCGCTG CCTGCTCGTC CTCACCCCGT GGTGGGTGGC CTTCCTGCTC
GGCTTCTCGG CGCTGATGGG GGAGAGCTTC GAGGTCACCA TGCACCCCTA CTTCTGGTGG
ATGCTGCTGG TCGTCCTGGT GACCACGCCG CTGCAGGCCG CCGGGGAGGA GTACCTGTTC
CGCGGGTTCG TCATGCAGTG GTTCGGCAGC TGGATCCCGT GGCGGTGGAT CTCGCTGGTC
GTCGCCACCC TCACCACCAC GGCCCTGTTC GCCCTGGCCC ACGGGTCGCT GGACCCCTGG
GTGCTGGCGG ACCTGGGCAT CTTCGCGATC CTCGCCGTCG CCATGACCGT GCGGACCGGT
GGTCTGGAGG CTGCCGTGGT GATGCACGCG GTGAACAACG TGGTGATCAT GGTGGTCTCG
CTGGTCTTCG GTGGCTTCGA GGACGGGTTC GTCAGCGCGG AGACCACCTC CTCCGCGATG
GCCGTGCTCG TCAGCGTGGT CCTGATGGGG GTGGCCTACC TCCTGATCGA GTGGCAGTGG
CGCCGCAGCG GCCACACGAA CCGCACCGCC TCCGCCGAGG AGCTGGCCGC CCCGCGCCGC
TGA
 
Protein sequence
MRVSHTPDSW NQQRPQPPEP HGPGQPQAPQ QPPHDPYAPR PEPQYGQYAP QGHGPQGGQF 
GPPPQGHGPQ GGQYGPPPQG YGPPPAPASS VRPNAEFHEL TRGPRWSWWR PLAALGLWIP
LGLAVIVVMV VSLVIPLVAY PDQMDIFEPG GTGETPTMQP LTFLGMNLGL AVLIPATIAV
IALAYWVRPG FASSVAGRFR WGWALRCLLV LTPWWVAFLL GFSALMGESF EVTMHPYFWW
MLLVVLVTTP LQAAGEEYLF RGFVMQWFGS WIPWRWISLV VATLTTTALF ALAHGSLDPW
VLADLGIFAI LAVAMTVRTG GLEAAVVMHA VNNVVIMVVS LVFGGFEDGF VSAETTSSAM
AVLVSVVLMG VAYLLIEWQW RRSGHTNRTA SAEELAAPRR