Gene Ksed_22000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22000 
Symbol 
ID8373703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2278723 
End bp2279526 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID644992442 
Producttransposase 
Protein accessionYP_003149948 
Protein GI256825988 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.208093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGCC GTCTGGTCGG GCTGAGCCGC TCCGCGTACC GGCGACCGCT CAAGGGCGAC 
ACGGTCACGG ACCCGGATCG GGCGCTCAGG GAGTGGCTGC GCGCCTGGGC GAAGGACCAT
CCCCGCTACG GGTATCGGCG GGCGTATCAC GACGCCCGCG CCGAGGGGTG GGTGGTGAAC
CACAAGAAGA TCCAACGCCT GTGGCGTGAC GAAGGGCTCC GGGTCCCGCA GCGGCGTCGA
CGCAAGCGCG TCGGGTCCTC GACCGTCGAC GCGCCGACGG CGGACGCGCC GAACGTGGTG
TGGGCGGTGG ACTTCCAGTT CGACGCCGAC GAGCACGGAC GACCGATCAA GATCTGCTCG
ATCGTCGACG AACACACCCG GGAGTGCATC GGCGGCCTCG TGGAGCGCTC GATTACCGCC
GACCGACTCA CCGCCCACCT CGAGGACCTC GTCGCCGCCC GGGGCGCCCC GGCGGTGCTC
AGGTCGGACA ACGGGCCGGA GTTCATCAGC GAGGCGATGG CCGACTGGGC CGGCACCCGC
ACCGGCCTGT CCTACATCCC TCCGGGCTCG CCGTGGCGCA ACGGGTACGT CGAGTCGTTC
AACAGCCGGA TCCGCGACGA GTGCCTCAAC ATCAACAGCT TCTACTCGCT GCTGCACGCA
CAGGTCATCA TCGGCGACTG GAAGGACGAG TACAACCACC ACCGCCGGCA CTCCTCGCTC
GGCTACCTAA CCCCAGCCGA GTACGCTCGG CAGTGCACCC ATCAAATGGA AACCGACGAC
TCACAGAACG TCCGGACCGA ATGA
 
Protein sequence
MACRLVGLSR SAYRRPLKGD TVTDPDRALR EWLRAWAKDH PRYGYRRAYH DARAEGWVVN 
HKKIQRLWRD EGLRVPQRRR RKRVGSSTVD APTADAPNVV WAVDFQFDAD EHGRPIKICS
IVDEHTRECI GGLVERSITA DRLTAHLEDL VAARGAPAVL RSDNGPEFIS EAMADWAGTR
TGLSYIPPGS PWRNGYVESF NSRIRDECLN INSFYSLLHA QVIIGDWKDE YNHHRRHSSL
GYLTPAEYAR QCTHQMETDD SQNVRTE