Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_22000 |
Symbol | |
ID | 8373703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 2278723 |
End bp | 2279526 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644992442 |
Product | transposase |
Protein accession | YP_003149948 |
Protein GI | 256825988 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.208093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTGCC GTCTGGTCGG GCTGAGCCGC TCCGCGTACC GGCGACCGCT CAAGGGCGAC ACGGTCACGG ACCCGGATCG GGCGCTCAGG GAGTGGCTGC GCGCCTGGGC GAAGGACCAT CCCCGCTACG GGTATCGGCG GGCGTATCAC GACGCCCGCG CCGAGGGGTG GGTGGTGAAC CACAAGAAGA TCCAACGCCT GTGGCGTGAC GAAGGGCTCC GGGTCCCGCA GCGGCGTCGA CGCAAGCGCG TCGGGTCCTC GACCGTCGAC GCGCCGACGG CGGACGCGCC GAACGTGGTG TGGGCGGTGG ACTTCCAGTT CGACGCCGAC GAGCACGGAC GACCGATCAA GATCTGCTCG ATCGTCGACG AACACACCCG GGAGTGCATC GGCGGCCTCG TGGAGCGCTC GATTACCGCC GACCGACTCA CCGCCCACCT CGAGGACCTC GTCGCCGCCC GGGGCGCCCC GGCGGTGCTC AGGTCGGACA ACGGGCCGGA GTTCATCAGC GAGGCGATGG CCGACTGGGC CGGCACCCGC ACCGGCCTGT CCTACATCCC TCCGGGCTCG CCGTGGCGCA ACGGGTACGT CGAGTCGTTC AACAGCCGGA TCCGCGACGA GTGCCTCAAC ATCAACAGCT TCTACTCGCT GCTGCACGCA CAGGTCATCA TCGGCGACTG GAAGGACGAG TACAACCACC ACCGCCGGCA CTCCTCGCTC GGCTACCTAA CCCCAGCCGA GTACGCTCGG CAGTGCACCC ATCAAATGGA AACCGACGAC TCACAGAACG TCCGGACCGA ATGA
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Protein sequence | MACRLVGLSR SAYRRPLKGD TVTDPDRALR EWLRAWAKDH PRYGYRRAYH DARAEGWVVN HKKIQRLWRD EGLRVPQRRR RKRVGSSTVD APTADAPNVV WAVDFQFDAD EHGRPIKICS IVDEHTRECI GGLVERSITA DRLTAHLEDL VAARGAPAVL RSDNGPEFIS EAMADWAGTR TGLSYIPPGS PWRNGYVESF NSRIRDECLN INSFYSLLHA QVIIGDWKDE YNHHRRHSSL GYLTPAEYAR QCTHQMETDD SQNVRTE
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