Gene Ksed_21960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21960 
Symbol 
ID8373699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2273540 
End bp2274763 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content77% 
IMG OID644992439 
ProductMajor Facilitator Superfamily transporter 
Protein accessionYP_003149945 
Protein GI256825985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.847097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGC ACCTCCGGCG GCTGCTGACC GTCTTCACCC TGGGCCAGCT CGGCTCGTGG 
ACCGGCACCG GTGCCATCGC CTGGATCGCC GTCCGCCACC TGGACGCCAC CGGGACCGAG
CTCGGCCTCC TGCTCGGCCT GGGGACCTTC CTCGGGATCC TGCTGGCCAA CCTCGCCACC
CCGCGCACGG CCGGCGCCCA CCCCGCCACC GTGCTGGGTG GCTCGGCGCT CGTCGCCGCT
CTGGCCGCCG CCTCGCTGGC GGTCGCGGGC TGGGTCGAGG CCGTGACCCT GCTCCACCTG
GGGGCGGTGC TCTGCCTCCA GACCGCCGCC GGGATGCTGC AGGCCGCCCG GATCGCGCCG
GCCATGCGCC AGGTGGCCGG CGACCACCTC GACCAGGCGC TGGGCCGTCA GGAGGCCATC
GCCTGGACGG CCACCATCGT CGGCCCGGCC GTCGGCGGCC TGCTCACCGA CGCCCTCGGG
GTGGAGGTGA CCCTGCTGGT GGTCGCCCTG CTCACCCTGG GCAGCGCCCT GAGCGCCCGC
GGGGTGGCCG GGATGGCGTG GGACCCCCCA CCGCCCCGCG AGCGCCCCCG CGCCGACGCG
GGTTACCGCA CCATCGCCGG CAGCCCGCTG CTGCGCCGGC TCCTCGGCAA CGCCCTGCTC
TTCACCGCCG GGACGATGGC CAGCACCCCG CTGGTGGACC TGCTGCTGCT GCGCACCCTG
GAGCTCTCGG CATGGGAGTA CGGGCTCTCG CAGGGGCTGC CCTGCCTCGG CGGGATCCTC
GCCGGGATGG TCGTGCACCG CCTCATGGGG CGCTTCGGGC GGCGCCCGGT CCTGCTCGCC
TCGGGGATCG GCCGCACCCT GTGGATCGCC CCGCTGGCCC TGGTGCCCTC CGGCCTGGCC
GGCGTGGCCG GGCTGGCCGT GGTGGTGGGC CTGCAGCTCG GCCTGCTGCT CGCGGCGGGC
TTCTTCAACC CGGCCTTCAG CCGGGTGCGG ATGGACGCCG CACCGGGGGA CCTGCTGGCC
CCGGTCATCG TGGCCTGGGC CACCCTCAAC CGGGCGGTGA GCGCCGCCGC CATGGCCCTG
GGCGGGGTGC TGGGCAGTCT CGTCGGCGTC CGGCCCGCCC TCCTGGCGGT GGGACTGGTG
ACGATGGCGA GCGCCCTCTT CCTCGTGGGC CTGCCCCACC CGCCGAGCGC CGACCCCGAG
CCGGAGGACG CCCCCGCGGC CTGA
 
Protein sequence
MPLHLRRLLT VFTLGQLGSW TGTGAIAWIA VRHLDATGTE LGLLLGLGTF LGILLANLAT 
PRTAGAHPAT VLGGSALVAA LAAASLAVAG WVEAVTLLHL GAVLCLQTAA GMLQAARIAP
AMRQVAGDHL DQALGRQEAI AWTATIVGPA VGGLLTDALG VEVTLLVVAL LTLGSALSAR
GVAGMAWDPP PPRERPRADA GYRTIAGSPL LRRLLGNALL FTAGTMASTP LVDLLLLRTL
ELSAWEYGLS QGLPCLGGIL AGMVVHRLMG RFGRRPVLLA SGIGRTLWIA PLALVPSGLA
GVAGLAVVVG LQLGLLLAAG FFNPAFSRVR MDAAPGDLLA PVIVAWATLN RAVSAAAMAL
GGVLGSLVGV RPALLAVGLV TMASALFLVG LPHPPSADPE PEDAPAA