Gene Ksed_21920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21920 
Symbol 
ID8373696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2268194 
End bp2269033 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content71% 
IMG OID644992436 
ProductRimK-like protein 
Protein accessionYP_003149942 
Protein GI256825982 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID[TIGR00768] alpha-L-glutamate ligases, RimK family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0852539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.847097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGCA AGGACGTGCT GCCCGCCATC GAGCGGGTGG GCGGCGCGCC GGTGGTCATC 
AAGCTCCTGG AGGGCACGCA GGGCATCGGG GTGATCCTGG CCCCGGAGAT GAAGGTGGCC
GAGGCCGTCA TCGAGACCCT GCAGTCCACC CAGCAGAACG TGCTCATCCA GCAGTTCGTC
TCGGAGTCCA AGGGGCGAGA CATCCGCGCC CTGGTGGTGG GTGACCGCGT GGTGGCGGCG
ATGCGGCGCA CCGCCCAGGG TGACGAGTTC CGCTCCAACG TGCACCGGGG CGGCAGCGTC
GAGGCAGTGA CGCTCGAGCC GGCCTTCGAG CAGACCGCCG TCCGGGCGGC GCAGATCATG
GGCCTGCGGG TGGCGGGCGT CGACATGCTC GAGGGCCGCG ACGGGCCGTT GGTGATGGAG
GTGAACTCCT CCCCGGGGCT GGAGGGCATC GAGACCGCCA CGGGGCTGGA CGTGGCCGGC
GCCATCATCG ACTACGTGGC CGACCAGGTG GACTTCCCGG AGATCGACGT GCGCCAACGA
CTGACCGTCT CCACCGGGTA CGGGGTGGCC GAGCTGGAGG TCCACTCCGG CCACGCGATG
GTGGGCGGCA CCCTCGAGGA CTCGGGGCTG CGGGAGCTGG ACATCTCGGT GCTGACCCTT
CACCGCGGGA CCAGCGTGAT CCCGAACCCG AGCGGGCGCC ACGTGCTGGA GGCCGGCGAC
CGGCTGCTGT GCTTCGGCAA GCTGGAGGAG ATGCGCTCGA TGGTGGCCCC GAAGCGGCGC
CGCCGCGCAC GGGTGAAGAA GCTGCCGCCG CAGCCGATGG GGGACGCCGC GCAGTCCTGA
 
Protein sequence
MDRKDVLPAI ERVGGAPVVI KLLEGTQGIG VILAPEMKVA EAVIETLQST QQNVLIQQFV 
SESKGRDIRA LVVGDRVVAA MRRTAQGDEF RSNVHRGGSV EAVTLEPAFE QTAVRAAQIM
GLRVAGVDML EGRDGPLVME VNSSPGLEGI ETATGLDVAG AIIDYVADQV DFPEIDVRQR
LTVSTGYGVA ELEVHSGHAM VGGTLEDSGL RELDISVLTL HRGTSVIPNP SGRHVLEAGD
RLLCFGKLEE MRSMVAPKRR RRARVKKLPP QPMGDAAQS