Gene Ksed_21850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21850 
Symbol 
ID8373689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2260254 
End bp2260943 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content75% 
IMG OID644992429 
ProductUracil-DNA glycosylase 
Protein accessionYP_003149935 
Protein GI256825975 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.00151672 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.371882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACG CTCCCACCTT CGCCGGCCGG GTCCACGACT CGTGGGTGCC CGTCCTCGAG 
CCCGCCGCCG AGACGCTGGC GGAACTCGGC ACCTTCCTGC GCGCCGAGAC CGCCGCCGGC
CGCGGCTACC TCCCGCCGGG CGACAGCATC CTGCGCGCCT TCACCCTGCC CCTCGATGCG
GTGCGCGTCC TCATCGTCGG CCAGGACCCC TACCCCACCC CCGGCCACGC GGTGGGCCTG
AGCTTCTCCG TGGCCCCGGA CGTCCGGCCC ATCCCGCGCT CGCTGCAGAA CATCTACACC
GAGCTGGTCG AGGACACCGG CTGCCCACGC CCCTCCACCG GCGACCTGAC CCCGTGGTTC
GAGCGCGGCG TCATGCTGCT CAACCGTTGC CTCACGGTCC GCCCCGGCGC CCCCGCCTCA
CACCGCGGCA AGGGCTGGGA GCGCATCACC CAGCTCGCCA TCGGTGCCCT GGCGCAGCGC
GCCCGCGACG GTCAACCGCT GGCCGCCGTC CTCTGGGGCC GCGACGCCCG CGACCTGGCC
CCCCACCTGG CCCCGATGCC GTGCGTCGAG TCCCCGCACC CCTCCCCCCT GAGCGCCAGC
CGGGGCTTCT TCGGCTCCCG CCCCTTCACC CGCACCAACG AGCTCCTCGC GCAGCAGGGT
GCCGACCCCA TCGACTGGAG ACTGCCGTGA
 
Protein sequence
MNDAPTFAGR VHDSWVPVLE PAAETLAELG TFLRAETAAG RGYLPPGDSI LRAFTLPLDA 
VRVLIVGQDP YPTPGHAVGL SFSVAPDVRP IPRSLQNIYT ELVEDTGCPR PSTGDLTPWF
ERGVMLLNRC LTVRPGAPAS HRGKGWERIT QLAIGALAQR ARDGQPLAAV LWGRDARDLA
PHLAPMPCVE SPHPSPLSAS RGFFGSRPFT RTNELLAQQG ADPIDWRLP