Gene Ksed_21780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21780 
Symbol 
ID8373682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2256164 
End bp2256898 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content73% 
IMG OID644992422 
Productpredicted HAD superfamily hydrolase 
Protein accessionYP_003149928 
Protein GI256825968 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0000727615 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.178862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCC CTCGCCCGTC CACCGTGCGC CTGCTGCTGC TGGACGCCGA TGCCGTGATC 
CAGCGGATGC CCGACACCTG GCGCGACGAC GCCCTGGCCC ACCTCGCGGC CGGATGGGGT
GCCTCGGCCG AGGACCTGGC CGCCGACACC GCGCTGTGGG GCCGCACGCG CGCCGTGCTC
GACGAGATCT TCGTGGCCGA GGTGTCGCTG CTCTCCGGCG GTGAGGACGA CCCGACCTTC
CCCGAGGTCA TCGCCACCGT CCTGGACGAC CACGACAACT CCGCCGACCC CGAGGCGACC
GCTGCTCTGT GGCACAACAC GGTGGCTCTG GAGGAGGAGC GCGCGATGGT GGTCGCGGCC
CGCCAGCGCG GTCTGCGGGT GGCCATGGCC ACCAACCAGC AGCCCCACCG CGCCGCGTGG
TTGGACGAGA GCCGCGCCTT CGCCGAGATC AGCGACGTCG TCTACACCTC CTCGGGCTTG
GGGGCGGCGA AGCCGGACCC GGAGTTCTTC CGCCGCATCC TGGCCGCGGA GGCCGACGCC
GGCTTCCCCG TGCGTCCCGA GGAGGTTGTC TTCGTGGACG ACCGCCCGGA CAACGTGGCC
GGCGCCGCCG AGGTGGGCAT CACCGCCCGG GACTACCACT TCGACCAGGG GCCGGAGATG
TTCGCCGAGG TGCTCCAGTC CACCGGGGTG CTCCTGCTCT CGATGCACGA CGGGCCGTCC
GACCCGGCCG TGTGA
 
Protein sequence
MPTPRPSTVR LLLLDADAVI QRMPDTWRDD ALAHLAAGWG ASAEDLAADT ALWGRTRAVL 
DEIFVAEVSL LSGGEDDPTF PEVIATVLDD HDNSADPEAT AALWHNTVAL EEERAMVVAA
RQRGLRVAMA TNQQPHRAAW LDESRAFAEI SDVVYTSSGL GAAKPDPEFF RRILAAEADA
GFPVRPEEVV FVDDRPDNVA GAAEVGITAR DYHFDQGPEM FAEVLQSTGV LLLSMHDGPS
DPAV