Gene Ksed_21650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21650 
Symbol 
ID8373669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2244861 
End bp2245577 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content74% 
IMG OID644992411 
Productpredicted membrane protein 
Protein accessionYP_003149917 
Protein GI256825957 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0140026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0791748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCC CTGCAACCCC CGCCACGGAA CGCACCCCGC GCCGCTCCCG CCGCACGGAG 
CTGGCCACCC TCGGGCCCCT CGCCCAGCTG CGCGCCGGGC GCCTCCCGCT GCGCCTGACC
TGGCTGTTGG TGGGGCTGGC GCTCTACGGC GCCTCGATGG CGATGGTGCT GCGCGCCACC
CTGGGGCAGA TCCCGTGGGA CGTCTTCCAC GTGGGCCTGG GCACGCACCT GCCGCTGAGC
TTCGGGCTCA CCGTGGTGCT GGTCGGTGTC CTGTTGCTGC TGCTGTGGAT CCCGCTGCGC
CAGCCACCGG GCCTCGGCAC CCTGGGCAAC GCGCTCCTCA TCGGACCGGC CGCCGACCTG
ACGCTGGCGT TGCTCCCGAC GCCGGAGGAC TGGGCGCCCC GCATCGGCCT GATGGTGGCC
GGCATCGCGC TGAACGGGGT CGCGAGCGCC ATGTACATCG GTGCGCAGCT GGGCCCCGGG
CCGCGTGACG GGTTGATGAC CGGCCTGGCG CACACCACTG GGTGGTCCCT GCGCGTGGTG
CGCACCGGCC TGGAGGTGAC CGTGATCGTG GCCGGCGTGC TCCTGGGCGG CACCCTCGGA
GTGGCGACGA TCCTCTACGC GCTGGCGATC GGCCCGCTGA CGCAAGCCTT CCTGCCCTAC
CTCACGGTGC GCTTGGCCGA CGGCACCGAA CGACCTCCGG CTGCCCCCAC GGCCTGA
 
Protein sequence
MTSPATPATE RTPRRSRRTE LATLGPLAQL RAGRLPLRLT WLLVGLALYG ASMAMVLRAT 
LGQIPWDVFH VGLGTHLPLS FGLTVVLVGV LLLLLWIPLR QPPGLGTLGN ALLIGPAADL
TLALLPTPED WAPRIGLMVA GIALNGVASA MYIGAQLGPG PRDGLMTGLA HTTGWSLRVV
RTGLEVTVIV AGVLLGGTLG VATILYALAI GPLTQAFLPY LTVRLADGTE RPPAAPTA