| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_21640 |
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| Symbol | |
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| ID | 8373668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 2243428 |
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| End bp | 2244681 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644992410 |
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| Product | trypsin-like serine protease with C-terminal PDZ domain |
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| Protein accession | YP_003149916 |
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| Protein GI | 256825956 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.00345268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0571371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC ACGGGCAGGA CGAGCCGTAC GGCCAGGGTG ACCAGTACCC GCCCTACAGC
TCGTCGAGGC AGTACGAGGA CGCCCCGCAG CGTTCGCGTG GCTGGTGGCA GGTGCCCACC
GCCGCGGTGC TGTCGGCTGC CCTGGCCACC GCCGGTACCT GGACGCTGGC GGAGAACGGA
GTCATCGGTT CCGGGGGCAG CACCTCCCCC TCGGAGAGCC AGGTGGCGCA GGGCGAGCCC
GCCAGCGACC GCCAGGACGG CGCCGGTGAG TCCGACGGCT CCGGTGACGG CGCCGAGTCG
GGCGACGGCG CGAAGGCCGC CCCCGTGGCG ACCGCCGACG GTGTCGACTG GTCCGGGGTG
GCCGAGCAGG TCTCCCCCAG CGTGGTCGCC ATCTCGGTGG CCAGTGCCAC GGCGGGTGGG
TCGGGCTCCG GCGTGATCCT CGACGAGCAG GGCCACGTGG TCACCAACGA CCACGTCGTC
AGCGGCGCTC AGGACATCCG GGTGACCATC GGCGACAACC GGGCGTACGA CGCCACCGTC
GTGGGCACCG ACCCTGAGAC GGACCTCGCG GTCCTGAAGA TCGACCAGGC GCCCGAGGAC
CTGCAGCCGA TCACGGTCGG GGACGACAAG GAGCTCAACG TCGGCGACCC TGTGATGGCT
GTGGGTAACC CGCTGGGCCT CTCGGGCACC GTGACCACCG GCATCGTCAG CGCGCTGGAC
CGCCCGGTCC GGGCCGGTGA CGCCGAGACC CAGGTGGTGA CGAACGCGGT GCAGACCTCC
GCGGCGATCA ACCCGGGAAA CTCCGGCGGC GCGCTGGTGA ACTCCGCCGG CGAGCTGGTG
GGCATCAACT CCAGCATCGC CACCCTGGGC TCCAACGGCC AGGAGGGCGG CAACATCGGC
ATCGGGTTCG CCATCACGGC CACCCAGATG AAGAACGTCA CCAGCGAGCT CATCGAGACC
GGCAAGGCCA CCCACGCGCA GCTGGGCGTC CGGGTCACCG ACGCCACGGT GCAGGTCGAC
GGCGCCCACG TGAACGGCGC CGGCATCGCG TCGGTGGAGC CGAACACCGC CGCGGCCGAG
GCCGGGCTCG AGGAGGGCGA CGTGGTGGTG GCCATCGACG GTGAGTCGGT GGACAGCATG
TGGGCCCTCA TCGCCCAGAT GCACGAACGA GCCGTCGGCG AGACCGCCAC CGTCACGGTG
GTGCGCGACG GCGAGCGCCA GGACGTGGAG GTGACCGCCG GCGCCAAGGA ATGA
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| Protein sequence | MTQHGQDEPY GQGDQYPPYS SSRQYEDAPQ RSRGWWQVPT AAVLSAALAT AGTWTLAENG
VIGSGGSTSP SESQVAQGEP ASDRQDGAGE SDGSGDGAES GDGAKAAPVA TADGVDWSGV
AEQVSPSVVA ISVASATAGG SGSGVILDEQ GHVVTNDHVV SGAQDIRVTI GDNRAYDATV
VGTDPETDLA VLKIDQAPED LQPITVGDDK ELNVGDPVMA VGNPLGLSGT VTTGIVSALD
RPVRAGDAET QVVTNAVQTS AAINPGNSGG ALVNSAGELV GINSSIATLG SNGQEGGNIG
IGFAITATQM KNVTSELIET GKATHAQLGV RVTDATVQVD GAHVNGAGIA SVEPNTAAAE
AGLEEGDVVV AIDGESVDSM WALIAQMHER AVGETATVTV VRDGERQDVE VTAGAKE
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