Gene Ksed_21610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21610 
Symbol 
ID8373665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2239747 
End bp2241012 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content73% 
IMG OID644992407 
ProductProtein of unknown function (DUF2029) 
Protein accessionYP_003149913 
Protein GI256825953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.0338543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0110628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATCG TGCCCTCCTC CACCTCTGCC CCGTCCCCTG CCGGTACCAG CCCGGGCGCG 
CAGCGTGCCC TGCGCCTCTG GGTGCCCGCG CTGCTCGTCA GCGTGGCCGC CCTGGCGGCC
CTGTGGATCA ATGGCGGTTG GCCGGTGGAC CTCGAGGTGT ATCGATGGGG TGGCCAGCTG
GTGGCCGACG GCGACAGCCT CTACGCGCCG CGCGAGGGCC TGCCGTTCAC CTACCCGCCT
TTCGCCGCGC TGCTCTTCGT CCCGCTGGCG CTCGCCCCGC AGGCGGTCGC CCTCGGGCTG
GTGGTGCTCG GTTCCGCGCT GGGTCTGGTG GTGGTGCTGC GCCGGGCCCT GGAGGGTGCG
CGCGAGGGCT CCATGACCTT CCTGGGCCAC CGGTTGGCGC CCACCTGGAA GATGTTGGGT
GTGCTGGCCG TGGCCGCCGT GGTCTGCGAG CCCATGTGGC AGACCTTCTC GTTCGGCCAG
GTGAACCTCC TGCTGGCGGG CCTGCTGGCC GCGGACCTGC TGCGCCGCGG CGACCGCCCC
TGGCGCGGGG TGTGGCTGGG CGTGGCCGCC GGCATCAAGC TCACGCCGAT CTTCCTGCTG
GCCTGGCTGG TGCTGAGCCG CCAGTGGCGG GCAGCGGGCG TGGCACTGGG GGCGATGCTG
TCCACCATCG GCCTGGGCTT CCTCGTGCTG CCGGGTGACT CGCGGGCCTT CTGGACCGAG
GTGTTGCCGG AGACGGGGCG GATCGGCGCG CCCAGCTACG TGGCCAACCA GTCGGTCAAG
GGCGTGCTCG CGCGCTTCCT GGGCGACGAG GCCCCGGCGC TCGACCCGGC GTGGTTCGTC
ATCTCGGTGG TGGTGGGTGT GGTGCTGGTG CTGGCCGCGG CGCGCCTGAG CGCCCTGGGC
GACCGTTCCG CCGGGCTCTG GGTGGCCTCG ATCGGGATGC TGCTGGCCTC CCCGGTGAGC
TGGTCCCACC ACTGGGTGTG GATGGTCCCC CTGGCGCTGG CGGTACTGTG CTCGGCAGCC
CGGAAGGACG TGCCCCGCCT GGCGCGGTGG GCTGCGGGGG GCATGCTGGC TGCGGCAGTG
CTGCAGGTGA TCTGGTGGGT CCCCTCCCGG GACGGACGCG AACTGGAGTG GAACGCATGG
CAGATGGTGT TGGGGAACGC GTACGTGTGG GGCGGTCTGT TGCTGACGGT GGCCCTGGTG
CCGTTGGCGG CGCGGCAGGT GCGCGAGCTG CTGGCCGGCC GCGGGGGCGT GGGGTCCGAC
GCATGA
 
Protein sequence
MRIVPSSTSA PSPAGTSPGA QRALRLWVPA LLVSVAALAA LWINGGWPVD LEVYRWGGQL 
VADGDSLYAP REGLPFTYPP FAALLFVPLA LAPQAVALGL VVLGSALGLV VVLRRALEGA
REGSMTFLGH RLAPTWKMLG VLAVAAVVCE PMWQTFSFGQ VNLLLAGLLA ADLLRRGDRP
WRGVWLGVAA GIKLTPIFLL AWLVLSRQWR AAGVALGAML STIGLGFLVL PGDSRAFWTE
VLPETGRIGA PSYVANQSVK GVLARFLGDE APALDPAWFV ISVVVGVVLV LAAARLSALG
DRSAGLWVAS IGMLLASPVS WSHHWVWMVP LALAVLCSAA RKDVPRLARW AAGGMLAAAV
LQVIWWVPSR DGRELEWNAW QMVLGNAYVW GGLLLTVALV PLAARQVREL LAGRGGVGSD
A