Gene Ksed_21400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21400 
Symbol 
ID8373644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2209141 
End bp2211210 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content70% 
IMG OID644992387 
Productpredicted phosphatase 
Protein accessionYP_003149893 
Protein GI256825933 
COG category[R] General function prediction only 
COG ID[COG3211] Predicted phosphatase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000286399 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCAACG AAGGCCGTCG CCTCCTGCCC CTCCTGACCC AGCCCCTCAC CGGTGGCCGT 
CAGTCCATGA CCTGCAAGTA CCGCTGCGCC GACCAGTGCG CGCAGCCCAC GCCGAACACC
TCCGACAACA CCTACTTCGG CGACGTCGTG GCCGACGGCG CCAGCCGCCG CCAGGTGCTC
CTGGCCGGCG GCCTGGGCCT CGCGGCCGCC GCTGCGGCCG GGACCGCCAA CATGCCGTCC
GCCGGCGCCG CGAACGTGCA GACCGAGGGC GCGAACGTCC TGGGCTTCGA CCCGATCGTC
CCCACCCCCG CCGACGTGGA CGAGCTCCGC GTGCCGGACG GCTTCGAGTG GAAGGCCATC
TCCAGCTGGG GTGACCCCAT CCGCGCCGGT GCCCCGAAGC TGGACTTCGA GAACCAGACC
GAGGCCGCGC AGCTCGAGCA GGTCGGCTAC AACGCCGACT TCGTCACCGT GGTCCCCACC
GGCAAGCACA CCGCCGTCCT GGGCTTCAAC AACGAGTACG TGAACCCCGA GCTGATGTGG
CAGTCCGCCG CCGACGGCGA GGACCTCACC GACGAGCAGA TCCGCATCAC GATGGCGGCG
CACGGCCTGA CCATCGTCGG CCTGAAGCGC GGCAACGACA AGCAGTTCTA CCGCCACGAC
CTGTCCTCCC CGCTGAACCG CCGCATCCAC ATGGGCACCG AGTTCACCCT CACCGGTGCC
GCGGCCGGCC ACGACCTCAT GAAGACCTCC GCCGACCCGA GCGGCACGGT CGTGCTGGGC
ACGAACAACA ACTGCGCCGG TGGCCTGACC CCCTGGGGCA CCATCCTCTC CGGTGAGGAG
AACTGGCACG GGTACTTCGC CGGCGCCGGC GCCCCGGCCG AGATGGCCGA GGAGATCGAG
CGCTACGGCA TCGGCGACGA GGGCCGCTTC GCCTGGGAGA AGGTCGACGA CCGCTTCTCG
CTGGCCGCCG AGCCGAACGA GACCCACCGC TTCGGCTACA TCGTGGAGGT CGACCCCACC
GACCCGACCT CGACGCCGGT GAAGCACACC GCCCTGGGCC GCTTCAAGCA CGAGGGCGGC
AACACGATCA TCGCCGACAA CGGCAAGGTC GTGGTCTACA TGGGCGACGA CGAGCGCTAC
GACTACATGT ACAAGTTCGT CTCCGCCGGC ACCTACAAGG AGGGCGACAA GAAGCACAAC
ATGTCGCTGC TCTCCGAGGG CGACCTCTAC GTCGCCAAGT TCACCGGCGA CGGCTTCGAG
GACGGCGTCT GCGACGGCAC CGGCACCTGG ATCCCGCTGG TCAAGGACGG CAAGAGCGCC
GTCGAGGGCA TGTCCGTGGC CGAGGTGCTC ATCTTCACCC GCATCGCCGC CGACAAGGTG
GGCCCCACCA AGATGGACCG CCCCGAGGAC GTCGAGCCCA ACCCGGTCAA CCGCAAGATC
TACGCCGCGC TGACCAACAA CTCCAAGCGC TCGCCCTCCG AGATCGACGA GGCCAACCCG
CGCGCCGAGA ACAAGCACGG CCACATCATC GAGCTCACCG AGGCCGGTGG CGACCACACG
GCCGAGGAGT TCACGTGGAT GCTGGTGCTC ATCGCCGGTG ACCCCACCGA CCCCACCACC
TACTTCGCCG GCTACGACAA GTCCCGGGTG GCCCCCATCT CCTGCCCGGA CAACGTGGCC
TTCGACTCGG TGGGCAACCT GTGGATCGCC ACCGACGGCA TGCCCAGCGG CCTCGGTCAC
TGCGACGGCC TCTACATCAT GCCGGTGGAG GGTGAGGACC GCGGCAAGCT GCAGCAGTTC
CTCTCCGTCC CCGCCGCCGC CGAGTGCTGC GGCCCCTGGA TCGGCGCTGA CGGCACCTCG
GTGTTCATCG CCGTCCAGCA CCCCGGTGAG GCCGACGGCG CGTCCCCGGC CCACCCGGTC
TCGGTCTTCC CCTACGACGA CTACCGCCAG CCGCGTCCGG CCGTCGTCGA GGTGAAGCGC
AAGGCCGGTG GCCCGATCAT CGACACCGGC GTCGCGTCCG GTTCGGCCTT CGGCAACGCC
CAGGCCCGCG TGGGTTCGCT CCTCGGCTGA
 
Protein sequence
MRNEGRRLLP LLTQPLTGGR QSMTCKYRCA DQCAQPTPNT SDNTYFGDVV ADGASRRQVL 
LAGGLGLAAA AAAGTANMPS AGAANVQTEG ANVLGFDPIV PTPADVDELR VPDGFEWKAI
SSWGDPIRAG APKLDFENQT EAAQLEQVGY NADFVTVVPT GKHTAVLGFN NEYVNPELMW
QSAADGEDLT DEQIRITMAA HGLTIVGLKR GNDKQFYRHD LSSPLNRRIH MGTEFTLTGA
AAGHDLMKTS ADPSGTVVLG TNNNCAGGLT PWGTILSGEE NWHGYFAGAG APAEMAEEIE
RYGIGDEGRF AWEKVDDRFS LAAEPNETHR FGYIVEVDPT DPTSTPVKHT ALGRFKHEGG
NTIIADNGKV VVYMGDDERY DYMYKFVSAG TYKEGDKKHN MSLLSEGDLY VAKFTGDGFE
DGVCDGTGTW IPLVKDGKSA VEGMSVAEVL IFTRIAADKV GPTKMDRPED VEPNPVNRKI
YAALTNNSKR SPSEIDEANP RAENKHGHII ELTEAGGDHT AEEFTWMLVL IAGDPTDPTT
YFAGYDKSRV APISCPDNVA FDSVGNLWIA TDGMPSGLGH CDGLYIMPVE GEDRGKLQQF
LSVPAAAECC GPWIGADGTS VFIAVQHPGE ADGASPAHPV SVFPYDDYRQ PRPAVVEVKR
KAGGPIIDTG VASGSAFGNA QARVGSLLG