Gene Ksed_21250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21250 
Symbol 
ID8373629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2191572 
End bp2192882 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content73% 
IMG OID644992372 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003149879 
Protein GI256825919 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.287757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.606755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGC ACCACCCTCC CACCCCCCGG GGCACCGCGC TCGTGGTGGG CGCCAACCGC 
ATCCCCTTCG CCAAGGCCGG TGGGCACTAC GCCCAGGCCA GCAACCAGGA CATGCTCACC
GCCACGCTCG ACGGGCTGGT CGCCCGCTAC GGGCTGGCCG GTGAGCGACT GGGTGAGGTC
GCAGCCGGCG CCGTGCTCAA GCACGCCCGG GACTTCAACC TCACCCGCGA GGCCGTCCTG
GGCTCGGCCC TGGACGCGCG CACCCCTGCC TACGACCTGC AGCAGGCCTG TGGCACGGGT
CTGGAGACGG TCATCCAGGT GGCCAACAAG ATCGCCGCCG GCCAGATCGA GGCGGGCATC
GGCGCCGGGG TCGACACCGC ATCGGACGCC CCGATCTCCC TGGGCGACGG CCTGCGCCGG
GCGCTGCTCG ACCTCTCCCA CGCCAAGAAG CCGGCCCAGA AGCTCAAGGC GCTGGGCTCC
ATCCGCCCCG GCGACCTCGC GCCGGAGTCC CCCCAGAACG CAGAGCCCCG CACCGGCCTG
TCGATGGGGG AGCACATGGC CCGCACGGCG GCCGAGTGGA AGATCACGCG CGAGGCGCAG
GACGCGCTCG CGGTGCGCAG CCACCAGAAC CTCGCCGCGG CCTGGGACGA GGGCTTCTTC
GACAAGCTGG TGACGCCCTA CCTGGGTCTG TCGCGCGACG CGTTCCTGCG GCCGGACACC
ACCGAGGAGA AGCTGGCCGG GCTCAAGGTC GTCTTCGGCA AGGACGGCTA CGCGGGCCAG
CCGGGGACGC TCACCGCCGG GAACTCCACG CCGCTCACCG ACGGGGCGGC GGCTGTGCTG
CTCTCCTCGC CCGAGTGGGC CGCGCAGCAC CGGCTGACCC CGCTGGCGCG CTTCGTGGAC
GCCGAGGTGG CGGCCGTCGA CTACGTCCAC GGCGACGACG GGCTGCTCAC CGCCCCGATC
TTCGCGGTGC CGCGTCTGCT CGAGCGCCAG GGCGTGAGCC TGCAGGACTT CGACTTCTAC
GAGATCCACG AGGCGTTCGC CTCCACGGTC GAGGTCACGC TGGCAGCGTG GGAGGACGAG
GAGTTCTGCC GCACCCGGCT GGGGTTGCCC GGAGCGCTGG GGGCCATCGA CCGCAGCCGG
TTGAACGTCA AGGGCTCCTC GCTGGCTGCG GGGCACCCCT TCGCCGCCAC CGGCGGCCGC
ATCGTCGGCA CGCTCGCCCA GCTGCTGCAC CAGAAGGGCA GCGGCCGCGG GCTCATCTCC
ATCTGCGCCG CCGGTGGTCA GGGTGTCGTC GCGATCCTGG AGGCCGTGTG A
 
Protein sequence
MAEHHPPTPR GTALVVGANR IPFAKAGGHY AQASNQDMLT ATLDGLVARY GLAGERLGEV 
AAGAVLKHAR DFNLTREAVL GSALDARTPA YDLQQACGTG LETVIQVANK IAAGQIEAGI
GAGVDTASDA PISLGDGLRR ALLDLSHAKK PAQKLKALGS IRPGDLAPES PQNAEPRTGL
SMGEHMARTA AEWKITREAQ DALAVRSHQN LAAAWDEGFF DKLVTPYLGL SRDAFLRPDT
TEEKLAGLKV VFGKDGYAGQ PGTLTAGNST PLTDGAAAVL LSSPEWAAQH RLTPLARFVD
AEVAAVDYVH GDDGLLTAPI FAVPRLLERQ GVSLQDFDFY EIHEAFASTV EVTLAAWEDE
EFCRTRLGLP GALGAIDRSR LNVKGSSLAA GHPFAATGGR IVGTLAQLLH QKGSGRGLIS
ICAAGGQGVV AILEAV