Gene Ksed_21020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21020 
Symbol 
ID8373606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2175100 
End bp2175531 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID644992351 
ProductLSU ribosomal protein L11P 
Protein accessionYP_003149861 
Protein GI256825901 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.116118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCCA AGAAGAAGGT CGCCAGCTTC ATCAAGCTGC AGATCGAGGC CGGTGCCGCC 
ACCCCGGCGC CCCCGGTCGG CCCGGCCCTC GGTGCCGCCG GTGTCAACAT CATGGACTTC
GTCAAGGCGT ACAACGCTGC GACGGAGAAC CAGCGCGGCA ACATCATCCC GGTGGAGATC
ACGGTCTACG AGGACCGCTC CTTCACCTTC ATCACCAAGA CCCCGCCGGC CGCCCAGCTC
ATCAAGAAGG CTGCGGGCGT CCCCAAGGGT TCCGGTGAGC CGCACGTGAC CAAGGTCGGC
AAGATCAGCG ACGCCCAGAT CGCCGAGATC GCCGAGCTGA AGATGGCCGA CCTCAACGCC
AACGACCTCG ACATGGCCAA GCGCATCATC GCCGGCACCG CCCGCTCCAT GGGCATCACC
GTCGAGGGCT GA
 
Protein sequence
MAPKKKVASF IKLQIEAGAA TPAPPVGPAL GAAGVNIMDF VKAYNAATEN QRGNIIPVEI 
TVYEDRSFTF ITKTPPAAQL IKKAAGVPKG SGEPHVTKVG KISDAQIAEI AELKMADLNA
NDLDMAKRII AGTARSMGIT VEG