| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_20950 |
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| Symbol | rpoB |
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| ID | 8373599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 2164044 |
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| End bp | 2167529 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644992344 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_003149854 |
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| Protein GI | 256825894 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.81555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTGCCT CGCGCACTGC TGACCAGAAC GTCTCGACCG CACGCACCGC TTCCGGGCGT
CTGTCGTTCT CCCGCATCCA CGAGCCCCTC GAGGTCCCCG ACCTCCTGGC GCTCCAGACC
GAGAGCTTCG ACTGGCTCCT CGGCAACGAG GCCTGGCAGG AGCGGGTCGC CGAGGCTTCG
GCCGCAGGTC GCAACGACAC CTCCACCACC TCGGGTCTGG AGGACATCTT CGAGGAGATC
TCCCCCATCG AGGACTTCTC GGAGACGATG TCCCTGAGCT TCTCCGAGCA CCGCTTCGAG
GAGATCAAGT ACACCGAGGA GGAGTGCATC GAGCGGGACA TGACCTACTC GGCGCCCCTG
TTCGTGACCG CCGAGTTCAT GAACGGCGAG ACCGGCGAGA TCAAGTCGCA GACCGTCTTC
ATGGGCGACT TCCCGTTGAT GACCAAGCGC GGCACCTTCA TCATCAACGG CACCGAGCGT
GTCGTGGTGT CCCAGATCGT GCGTTCCCCG GGCGTCTACT TCGAGCGCTC CATCGACCGC
GCGACCGACA AGGAGGTCTA CTCCGCGAAG GTCATCCCCA GCCGTGGTGC GTGGCTGGAG
TTCGAGGTCG ACAAGAAGGA CATGGTCGGC GTGCGCGTCG ACCGCAAGCG CAAGCAGTCC
GTCACCGTCC TGCTCAAGGC CCTCGGCTGG ACCGAGGCGC AGATCCTCGA GGAGTTCGGC
CAGTACGAGT CCATCCGCGC GACGCTGGAG AAGGACCACA CGGCCAACCA GGACGAGGCC
CTGCTGGACA TCTACCGCAA GCTGCGCCCG GGGGAGCCGC CGACCGTCGA GGCCGCCCAG
AACCTGCTGG ACAACCTCTA CTTCAACGGC AAGCGCTACG ACCTCGCGAA GGTCGGCCGC
TACAAGATCA ACAAGAAGCT GGGCCTGGAC GCCCCGCTGA CCGACTCCAC GCTCAGCGTG
GACGACGTGG TGCGCACCAT CAAGTACATC GTCGCGCTGC ACGCCGGCGA GACCACGATG
GAGGGCGTCC GCCACGGCGA GGCCGTGGAC CTGCGGGTCG AGACCGACGA CATCGACCAC
TTCGGCAACC GTCGTCTGCG CACCGTGGGT GAGCTCATCC AGAACCAGGT CCGCACCGGT
CTGTCCCGCA TGGAGCGCGT CGTCCGGGAG CGCATGACCA CCCAGGACGT CGAGGCGATC
ACGCCGCAGA CGCTGATCAA CATCCGTCCG GTCGTGGCGG CGATCCGCGA GTTCTTCGGC
ACCAGCCAGC TCTCGCAGTT CATGGACCAG AACAACCCGC TGGCCGGGCT GACGCACAAG
CGTCGCCTCA GCGCCTTGGG CCCCGGTGGT TTGTCCCGTG ACCGCGCCGG CATGGAGGTC
CGCGACGTCC ACCCGTCGCA CTACGGCCGC ATGTGCCCCA TCGAGACGCC GGAAGGCCCG
AACATCGGTC TGATCGGCGC CCTGGCCTCC TACGGGCGGA TCAACCCGTT CGGCTTCGTC
GAGACCCCCT ACCGCAAGGT CAAGGGCGGC TTCGTCACCG ATGACGTGGA GTACCTGACC
GCCGACGAGG AGGACGACTT CGTCATCGCG CAGGCCAACG CGCCGCTGAC CGAGGACGGC
CAGTTCGCCG GTGAGCGCGT GCTGGTCCGC TCCAAGGGCG GCGAGGTCGA GTTCGTGCCG
CGCGACGAGG TGCACTACAT GGACGTCTCG CCGCGCCAGA TGGTGTCCGC CGCCACGGCG
ATGATCCCCT TCCTGGAGCA CGACGACGCC AACCGCGCCC TGATGGGCGC GAACATGCAG
CGCCAGGGCG TGCCGCTGGT GAAGGCCGAG GCCCCGCTGG TGGGTACCGG CATCGAGTAC
CGCGCCGCGC TGGACACCGG CGACGTCGTG CGTGCCGAGA AGGCCGGCGT CATCCAGTCG
GTCTCCGCCG ACCTGGTGAC GGCGCAGAAC GACGACGGCA CCTACCAGAG CTACCGCATC
GACAAGTTCA GCCGCTCCAA CCAGGGCACC TGCTACAACC AGCGGGTCGT CGTGGCGGCG
GGTGACCACG TCGAGAAGGG CCAGCTGATC GCCGACGGCC CCTCCACCGA CAACGGTGAG
ATGGCGCTGG GCAAGAACCT GCTCGTGGCC TTCATGCCGT GGGAGGGCTA CAACTACGAG
GACGCGATCA TCCTGTCGCA GCGCCTCGTG CAGGACGACA CGCTCTCCTC GATCCACATC
GAGGAGCACG AGATCGACGC CCGCGACACC AAGCTGGGCC CGGAGGAGAT CACGCGGGAC
ATCCCGAACG TCTCCGACGA GGTGCTGGCC GACCTGGACG AGCGCGGCAT CATCCGCATC
GGTGCCGAGG TCCGCGACGG CGACCTGCTC GTCGGCAAGG TCACGCCCAA GGGTGAGACC
GAGCTGACCC CGGAGGAGCG CCTGCTGCGC GCCATCTTCG GCGAGAAGGC CCGCGAGGTG
CGCGACACCT CCATGAAGGT GCCGCACGGC GAGACCGGCA CGGTCATCGG CGTGAAGGTC
TTCGACCGCG AGGAGGGCGA CGAGCTGCCC CCGGGCGTGA ACCAGATGGT GCGCGTCTAC
GTGGCCAACA AGCGCAAGAT CACCGATGGT GACAAGCTCG CCGGCCGCCA CGGCAACAAG
GGCGTCATCT CCAAGATCCT GCCGGTCGAG GACATGCCCT TCCTGCCCGA CGGCACCCCG
GTGGACGTCG TGCTGAACCC GCTGGGTGTG CCCAGCCGCA TGAACGTCGG CCAGGTGCTC
GAGCTGCACC TCGGCTGGGC GGCTGCGAAC GGCTGGAAGA TCGAGGGCTC GCCCGAGTGG
GCCGAGAACC TCGCCGAGGA GCACCGCGAG GCCGGCCCGT GGACCCGTGT GGCCACCCCG
GTGTTCGACG GCGCCCGCGA GGAGGAGATC ACCGGCCTGC TCGACTCGAC GATCCCCTCG
CGCGACGGTC AGCGCCTCAT CGACGGCTCG GGCAAGGCCC AGCTGTTCGA CGGCCGCACC
GGTGAGCCGT ACCCGGAGCC GGTGTCCGTG GGCTACATGT ACATCCTCAA GCTCCACCAC
CTGGTGGACG AGAAGATCCA CGCCCGCTCG ACCGGCCCGT ACTCGATGAT CACGCAGCAG
CCGCTGGGCG GTAAGGCCCA GTTCGGCGGC CAGCGCTTCG GCGAGATGGA GGTCTGGGCC
CTGGAGGCGT ACGGCGCCGC CTACGCCCTG CAGGAGCTGC TGACCATCAA GTCGGACGAC
GTGACCGGCC GCGTGAAGGT CTACGAGTCC ATCGTCAAGG GCGAGAACGT CCCCGAGCCC
GGCATCCCCG AGTCCTTCAA GGTGCTCATC AAGGAGATGC AGTCCCTGTG CCTGAACGTC
GAGGTCCTCT CGACCGACGG CCAGAACATC GACCTGCGCG AGCAGGACCA GGAGGTCTTC
CGCGCGGCGG AGGAGCTCGG CATCGACCTG AGCCGGCGGG AGCCGAGCTC GGTCGAAGAG
GTCTGA
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| Protein sequence | MAASRTADQN VSTARTASGR LSFSRIHEPL EVPDLLALQT ESFDWLLGNE AWQERVAEAS
AAGRNDTSTT SGLEDIFEEI SPIEDFSETM SLSFSEHRFE EIKYTEEECI ERDMTYSAPL
FVTAEFMNGE TGEIKSQTVF MGDFPLMTKR GTFIINGTER VVVSQIVRSP GVYFERSIDR
ATDKEVYSAK VIPSRGAWLE FEVDKKDMVG VRVDRKRKQS VTVLLKALGW TEAQILEEFG
QYESIRATLE KDHTANQDEA LLDIYRKLRP GEPPTVEAAQ NLLDNLYFNG KRYDLAKVGR
YKINKKLGLD APLTDSTLSV DDVVRTIKYI VALHAGETTM EGVRHGEAVD LRVETDDIDH
FGNRRLRTVG ELIQNQVRTG LSRMERVVRE RMTTQDVEAI TPQTLINIRP VVAAIREFFG
TSQLSQFMDQ NNPLAGLTHK RRLSALGPGG LSRDRAGMEV RDVHPSHYGR MCPIETPEGP
NIGLIGALAS YGRINPFGFV ETPYRKVKGG FVTDDVEYLT ADEEDDFVIA QANAPLTEDG
QFAGERVLVR SKGGEVEFVP RDEVHYMDVS PRQMVSAATA MIPFLEHDDA NRALMGANMQ
RQGVPLVKAE APLVGTGIEY RAALDTGDVV RAEKAGVIQS VSADLVTAQN DDGTYQSYRI
DKFSRSNQGT CYNQRVVVAA GDHVEKGQLI ADGPSTDNGE MALGKNLLVA FMPWEGYNYE
DAIILSQRLV QDDTLSSIHI EEHEIDARDT KLGPEEITRD IPNVSDEVLA DLDERGIIRI
GAEVRDGDLL VGKVTPKGET ELTPEERLLR AIFGEKAREV RDTSMKVPHG ETGTVIGVKV
FDREEGDELP PGVNQMVRVY VANKRKITDG DKLAGRHGNK GVISKILPVE DMPFLPDGTP
VDVVLNPLGV PSRMNVGQVL ELHLGWAAAN GWKIEGSPEW AENLAEEHRE AGPWTRVATP
VFDGAREEEI TGLLDSTIPS RDGQRLIDGS GKAQLFDGRT GEPYPEPVSV GYMYILKLHH
LVDEKIHARS TGPYSMITQQ PLGGKAQFGG QRFGEMEVWA LEAYGAAYAL QELLTIKSDD
VTGRVKVYES IVKGENVPEP GIPESFKVLI KEMQSLCLNV EVLSTDGQNI DLREQDQEVF
RAAEELGIDL SRREPSSVEE V
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