| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_20940 |
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| Symbol | |
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| ID | 8373598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 2160099 |
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| End bp | 2163992 |
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| Gene Length | 3894 bp |
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| Protein Length | 1297 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644992343 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_003149853 |
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| Protein GI | 256825893 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGACG TCAACTTCTT CGACGAGCTT CGCATCGGCC AGGCAACGGC CGAGGACATC
CGCCAGTGGA GCCACGGCGA GGTCAAGAAG CCCGAGACGA TCAACTACCG CACCCTGAAG
CCCGAGAAGG ACGGACTCTT CTGCGAGAAG ATCTTCGGTC CCACCCGGGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG CGTCCGCTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC
GAGGTGACCC GTTCGGCCGT GCGCCGTGAG CGCATGGGCC ACATCGAGCT GGCCGCCCCG
GTCACGCACA TCTGGTACTT CAAGGGTGTG CCCAGCCGCC TCGGCTACCT GCTCGACCTG
GCGCCGAAGG ACCTCGAGAA GGTCATCTAC TTCGCGGCCT ACGTGATCAC CTCGGTGGAC
GTGGAGGGTC GCCACAACGA CCTGCCCTCG CTCGAGGCCG AGATCCAGAC CGAGATCAAG
GCTGCCGAGA ACCGTCGGGA CGCGGACGTG GAGGCCCGGG CCAAGAAGCT CGAGACCGAC
ATCGCCGCGC TCGAGGCCGA GGGCGCCAAG TCCGACGCCA AGCGCAAGGT CCGCGACTCC
GCGGAGCGCG AGATGAACCA GATCCGCAAG CGCGCCGACC AGCAGATCGA GCGCGTGGAG
CAGGTCTGGG ACCGCTTCAA GAACCTCAAG GTCCAGGACC TCGAGGGCGA CGAGATGCTC
TTCCGCGAGA TGCGTGACCG CTTCGGCATG TACTTCGAGG GCGGCATGGG TGCCGCGGCG
CTGCAGAAGC TGCTGCAGGA CTTCGACCTC GAGGCCGAGG CCGAGAAGCT GCGCGAGATC
ATCGCCACCG GCAAGGGCCA GAAGAAGACC CGTGCCCTGA AGCGACTGAA GGTCGTCACG
GCTTTCCTGA CCACGGACAA CGAGCCGCAG GGCATGGTCC TGGACGCCGT CCCGGTCATC
CCGCCGGACC TGCGCCCGAT GGTGCAGCTG GACGGTGGCC GCTTCGCGAC CTCCGACCTG
AACGACCTGT ACCGCCGCGT CATCAACCGC AACAACCGCC TCAAGCGCCT GTTGGACCTC
GGTGCCCCCG AGATCATCAT CAACAACGAG AAGCGGATGC TGCAGGAGTC GGTCGACTCG
CTGTTCGACA ACGGTCGTCG CGGTCGTCCG GTCACCGGGC CGGGCAACCG CCCGCTGAAG
TCGCTGTCCG ACATGCTCAA GGGCAAGCAG GGGCGTTTCC GCCAGAACCT GCTGGGCAAG
CGCGTGGACT ACTCGGGCCG TTCGGTCATC GTGGTGGGTC CGCAGCTGAA GCTGCACCAG
TGTGGTCTGC CCAAGCAGAT GGCCCTGGAG CTCTTCAAGC CGTTCGTGAT GAAGCGCCTG
GTCGACCTCG ACCACGCGCA GAACATCAAG TCGGCCAAGC GCATGGTCGA GCGCCAGAAC
CCGATGGTGT GGGACGTCCT CGAAGAGGTC ATCACCGAGC ACCCGGTGCT GCTGAACCGT
GCGCCCACGC TGCACCGCCT CGGCATCCAG GCCTTCGAGC CGCAGCTGAT CGAGGGCAAG
GCGATCCAGA TCCACCCGCT GGTCTGCACC GCTTTCAACG CCGACTTCGA CGGTGACCAG
ATGGCCGTGC ACGTGCCGCT GTCCGCCGAG GCGCAGGCCG AGGCCCGCAT CCTGATGCTG
TCGAGCAACA ACATCCTGAA GCCGGCCGAC GGTCGACCGG TGACCATGCC CACCCAGGAC
ATGATCATCG GCCTGTACCA CCTCACCTCC CAGGTGCTCG GCACCGAGGA GACCGAGGTG
AAGGACATGC GTCACTTCAC CAGCCAGGCC GAGGCCCGCA TGGCCTTCGA CCGGGGCGAG
ATCCAGCTGG GCACCCCGGT CGTCATGCGC CTGCCGCACG TCGTGCCGCC GGCGGACTTC
GAGGGCGAGG TGGAGCTCGA CGACAAGGGC TACGCCCCGG TGCTGACGCT CCCGACGACG
CTGGGCCGGG CGATCTTCAA CGAGTCCCTG CCGGAGAACT TCCCGTTCGT CAACAACCCG
GTGGACAAGA AGGTCCTGTC CAACATCATC AACGCCCTGG CTGAGCGCTA CGACAAGGTC
GACGTAGCCG CCTCGCTGGA CGCGTTGAAG GAGAACGGCT TCTACTGGGC GTCCCGCTCG
GGCACGACCG TGGCCATCTC CGACGTCGTG GTGCCGGACA ACAAGACCGA CATCCTCGAG
GGTTACGAGA CCAAGGCCGC CAAGGTCCAG GTCCAGTACG AGCGCGGTCT GATCACCGAC
GACGAGCGCC GTCAGGAGCT CATCGAGATC TGGACCCAGG CGACCAACGA GGTCGCGAAG
GTGATGGAGG CCAACTTCCC GGCCGACAAC CCCATCTACC GCATGGTCAC CTCCGGTGCC
CGTGGTAACT GGTTCCAGCT GCGTCAGATC GCTGGCATGC GTGGCCTGAT GGCCAACCCG
AAGGGCGAGA TCATCCCGCG TCCGATCAAG GCCTCGTTCC GCGAGGGCCT GACGGTGCTG
GAGTTCTTCA TCTCGACGCA CGGTGCCCGC AAGGGTCTGG CCGACACCGC CCTGCGTACC
GCGGACTCGG GCTACCTGAC CCGTCGTCTG GTGGACGTCT CGCAGGACGT CATCGTCCGC
GAGGCCGACT GTGGCACCGG TCGCGGTGTC GAGGTGACCA TCGGTCACCG CGGCTCGGAC
GGCACCGTCG TGATGGACGA GGAGGTCGAG TCGAGCGCCT ACGCCCGGAC GATCGCCGAG
GACGTCGAGG CCGATGGTGT GACCGTCGCC GAGGCGGGTG ACGACCTGGG TGACGTGCTC
ATCGAGCAGC TCGTCGCCGC GGGCGTGGAC AAGGTCAAGG TGCGCTCGGT GCTCACCTGC
CAGTCCTCCG TCGGCACCTG TGCCAAGTGC TACGGCCGCT CGCTGGCCAC CGGCCAGCTG
GTGGACATTG GTGAGGCCGT CGGCATCGTC GCCGCGCAGT CGATCGGTGA GCCCGGTACC
CAGCTGACGA TGCGTACCTT CCACACCGGT GGTGTGGCCG GTGACGACAT CACGCAGGGT
CTGCCGCGTG TGGTCGAGCT GTTCGAGGCC CGTACCCCCA AGGGTGTGGC CCCGATCGCC
GAGGCCGCGG GTCGCATCCG CATCGAGGAC GCGGACAAGC AGCGCCGCAT CATCCTGGTG
CCGGACGACG GCACCGAGGA GCACGCCTAC CTCGTCGGCA AGCGCGCCCG CGTGCTGGTC
GAGGAGGGCC AGGCCGTCGA GGCCGGGCAG CAGCTGGTCA TGGGTGCCGT CGACCCGAAG
CAGGTCCTGC GCATCCTCGG TCCGCGTGCG GTGCAGCAGC ACCTCGTGGA CGAGGTCCAG
GGCGTGTACC GCCAGCAGGG TGTGTCGATC CACCAGAAGC ACATCGAGGT CATCGTGCGG
CAGATGCTGC GCCGCATCAC GATCATCGAG GAGGGCGAGG CCAACCTGCT CGCCGGTGAC
CTGGTGGAGC GGTCCCGCTT CGAGACCGAG AACCGCCGCG TGGTGGCCGA GGGTGGCAAG
CCCGCCTCCG GTCGTCCTGA GCTGATGGGC ATCACCAAGG CCTCGTTGGC CACGGAGTCC
TGGCTGTCGG CCGCCTCCTT CCAGGAGACG ACCCGCGTCC TCACCGAGGC CGCGATGCAC
GGCAAGGGCG ACCCGCTGCT GGGCCTCAAG GAGAACGTCA TCCTCGGAAA GCTCATCCCG
GCCGGTACCG GGCTGCAGCG CTACCGCAAC GTGACGGTGG AGCCCACCGA GGAGGCGAAG
GCCCAGGCGT ACTCGATGAC CGACTTCGAG AGCTTCGACT TCTCGACCTT CGGCGAGGGC
ACCGGCGAGG CCGTCCGCCT CGACGAGGTC GACACCGGCG ACTACCGCTG GTGA
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| Protein sequence | MLDVNFFDEL RIGQATAEDI RQWSHGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRSAVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKVIY FAAYVITSVD VEGRHNDLPS LEAEIQTEIK AAENRRDADV EARAKKLETD
IAALEAEGAK SDAKRKVRDS AEREMNQIRK RADQQIERVE QVWDRFKNLK VQDLEGDEML
FREMRDRFGM YFEGGMGAAA LQKLLQDFDL EAEAEKLREI IATGKGQKKT RALKRLKVVT
AFLTTDNEPQ GMVLDAVPVI PPDLRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLLDL
GAPEIIINNE KRMLQESVDS LFDNGRRGRP VTGPGNRPLK SLSDMLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKQMALE LFKPFVMKRL VDLDHAQNIK SAKRMVERQN
PMVWDVLEEV ITEHPVLLNR APTLHRLGIQ AFEPQLIEGK AIQIHPLVCT AFNADFDGDQ
MAVHVPLSAE AQAEARILML SSNNILKPAD GRPVTMPTQD MIIGLYHLTS QVLGTEETEV
KDMRHFTSQA EARMAFDRGE IQLGTPVVMR LPHVVPPADF EGEVELDDKG YAPVLTLPTT
LGRAIFNESL PENFPFVNNP VDKKVLSNII NALAERYDKV DVAASLDALK ENGFYWASRS
GTTVAISDVV VPDNKTDILE GYETKAAKVQ VQYERGLITD DERRQELIEI WTQATNEVAK
VMEANFPADN PIYRMVTSGA RGNWFQLRQI AGMRGLMANP KGEIIPRPIK ASFREGLTVL
EFFISTHGAR KGLADTALRT ADSGYLTRRL VDVSQDVIVR EADCGTGRGV EVTIGHRGSD
GTVVMDEEVE SSAYARTIAE DVEADGVTVA EAGDDLGDVL IEQLVAAGVD KVKVRSVLTC
QSSVGTCAKC YGRSLATGQL VDIGEAVGIV AAQSIGEPGT QLTMRTFHTG GVAGDDITQG
LPRVVELFEA RTPKGVAPIA EAAGRIRIED ADKQRRIILV PDDGTEEHAY LVGKRARVLV
EEGQAVEAGQ QLVMGAVDPK QVLRILGPRA VQQHLVDEVQ GVYRQQGVSI HQKHIEVIVR
QMLRRITIIE EGEANLLAGD LVERSRFETE NRRVVAEGGK PASGRPELMG ITKASLATES
WLSAASFQET TRVLTEAAMH GKGDPLLGLK ENVILGKLIP AGTGLQRYRN VTVEPTEEAK
AQAYSMTDFE SFDFSTFGEG TGEAVRLDEV DTGDYRW
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