Gene Ksed_20900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20900 
Symbol 
ID8373594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2155343 
End bp2156536 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID644992339 
Producttranslation elongation factor 1A (EF-1A/EF-Tu) 
Protein accessionYP_003149849 
Protein GI256825889 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.191388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAAGG CAAAGTTCGA GCGGAGCAAG CCGCACGTCA ACATCGGCAC CATCGGTCAC 
ATCGACCACG GCAAGACGAC GCTGACGGCT GCCATCTCCA AGGTGCTGCA CGACCGTTAC
CCCGAGCTGA ACGAGGCGTC GCCTTTCGAC ACCATCGACA AGGCTCCGGA GGAGAAGCAG
CGCGGCATCA CGATCTCGAT CTCCCACATC GAGTACCAGA CCGAGGAGCG CCACTACGCG
CACGTCGACT GCCCCGGTCA CGCTGACTAC GTGAAGAACA TGATCACCGG TGCTGCCCAG
ATGGACGGCG CCATCCTCGT GGTCGCCGCC ACCGACGGCC CGATGCCGCA GACCAAGGAG
CACGTCCTCC TGGCCCGCCA GGTCGGCGTT CCGTACATCT GCGTGGCGCT CAACAAGTCC
GACATGGTCG ACGACGAGGA GATCATGGAG CTCGTCGAGA TGGAGGTCCG TGAGCTCCTC
TCGGAGTACG ACTTCCCGGG CGACGACGTC CCGGTGGTCC AGGTGTCTGC TCTGAAGGCC
CTCGAGGGCG ACGAGAAGTG GGGCGACCAG ATCATCGAGC TGATGACCGA GGTCGACAAG
GCGATCCCGG AGCCGGAGCG CGACATCGAT AAGCCCTTCC TCATGCCGGT CGAGGACGTG
TTCACCATCA CCGGTCGCGG CACCGTGGTG ACCGGTCGTA TCGAGCGTGG CATCCTGAAC
GTCAACGACG AGATCGAGAT CGTCGGCATC CAGGAGGAGA AGCAGTCCAC CACGGTCACC
GGCATCGAGA TGTTCCGCAA GCTGCTCGAC GAGGGCCGCG CCGGTGAGAA CGTCGGCCTG
CTGCTCCGTG GCACCAAGCG CGAGGACGTC GAGCGCGGTC AGGTCATCTG CAAGCCGGGC
TCGATCACCC CGCACAAGAA GTTCGAGGGC TCGGTCTACA TCCTGTCCAA GGACGAGGGT
GGCCGTCACA CCCCGTTCTA CGACAACTAC CGCCCGCAGT TCTACTTCCG CACCACCGAC
GTGACCGGTG TGGTCGACCT GCCGGAGGGC ACCGAGATGG TCATGCCCGG TGACAACACC
GAGATGTCCG TCGAGCTGAT CCAGCCCGTC GCCATGGAGG ACGGTCTGAA GTTCGCCATC
CGTGAGGGTG GTCGTACGGT CGGCGCCGGC CAGGTCACCA AGATCCTGGA CTGA
 
Protein sequence
MAKAKFERSK PHVNIGTIGH IDHGKTTLTA AISKVLHDRY PELNEASPFD TIDKAPEEKQ 
RGITISISHI EYQTEERHYA HVDCPGHADY VKNMITGAAQ MDGAILVVAA TDGPMPQTKE
HVLLARQVGV PYICVALNKS DMVDDEEIME LVEMEVRELL SEYDFPGDDV PVVQVSALKA
LEGDEKWGDQ IIELMTEVDK AIPEPERDID KPFLMPVEDV FTITGRGTVV TGRIERGILN
VNDEIEIVGI QEEKQSTTVT GIEMFRKLLD EGRAGENVGL LLRGTKREDV ERGQVICKPG
SITPHKKFEG SVYILSKDEG GRHTPFYDNY RPQFYFRTTD VTGVVDLPEG TEMVMPGDNT
EMSVELIQPV AMEDGLKFAI REGGRTVGAG QVTKILD