Gene Ksed_20890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20890 
Symbol 
ID8373593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2154401 
End bp2155228 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content72% 
IMG OID644992338 
Productuncharacterized membrane protein, possible Na+ channel or pump 
Protein accessionYP_003149848 
Protein GI256825888 
COG category[R] General function prediction only 
COG ID[COG1811] Uncharacterized membrane protein, possible Na+ channel or pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.38155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAC TCTTCCCCGG CGCGGGGACC CTGCTCAACG TGGTCGCGGT GCTGATGGGG 
TCCGCGGCGG GCATCGCCTT CGGTTCCCGG TTGCCGCAGC GCATCCACGA CGTCGTCACG
GACGGGCTGG GGCTGGTGAC GCTGATGATG GCGGGTCTGT CGGTGGTGGC GGTCACCTCG
CAGGACCTGG TCGCTGCCGT GGGGGAGGGG GTCCCCGTGT TGTTGGTGCT CGGCGCGCTG
CTGATCGGTG GCGTGACGGG CTCGGCCCTG CAGATCGAGC GGCGCATGGA GGGGGTGGCC
GGGTGGCTGC AACGGCGCCT GGACCGGACG GGCGTGCAGG ACGTCCTGGC CGAGGGGGGC
GAGGACGGCC CCGGCCCCGA TGGGGCGAAC GCGCAGGAGC CTGATCACGA GGCCACGCCG
CAGGAGCGCT TCGTGCAGGG GTGGACCTCG GCGTCCCTGC TCTTCTGCGT GGGGCCGTTG
ACGGTGTTGG GGGCCCTGAG CGACGGCCTG GGACTGGGCA TCGAACAGCT CGCGCTGAAG
TCCGCCCTGG ACTTCTTCGC GGCGCTGGCC TTTGCCTCGG CCTTCGGCGT CGGGGTCGTG
TTCTCCGCCC TGTCGGTCCT CGTGGTGCAG GGGCTCCTGA CGCTGGTGGG CCGGCTGGCA
GGGGAGGTGG TCCCCCTGTA CGCCGTTGAC GTCATGACCG CGGCGGGTGG CTTGTTGCTC
ATCGGGATCG CCCTGGGGTT GCTGCGCATC CGCACCGTTC CGGTGGGGGA CCTGCTCCCA
GCCCTCGTGG TCGCGCCGGT GCTGGCCTGG TGCGTCACGC TGGTGTGA
 
Protein sequence
MDGLFPGAGT LLNVVAVLMG SAAGIAFGSR LPQRIHDVVT DGLGLVTLMM AGLSVVAVTS 
QDLVAAVGEG VPVLLVLGAL LIGGVTGSAL QIERRMEGVA GWLQRRLDRT GVQDVLAEGG
EDGPGPDGAN AQEPDHEATP QERFVQGWTS ASLLFCVGPL TVLGALSDGL GLGIEQLALK
SALDFFAALA FASAFGVGVV FSALSVLVVQ GLLTLVGRLA GEVVPLYAVD VMTAAGGLLL
IGIALGLLRI RTVPVGDLLP ALVVAPVLAW CVTLV