Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_20890 |
Symbol | |
ID | 8373593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 2154401 |
End bp | 2155228 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644992338 |
Product | uncharacterized membrane protein, possible Na+ channel or pump |
Protein accession | YP_003149848 |
Protein GI | 256825888 |
COG category | [R] General function prediction only |
COG ID | [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.38155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGAC TCTTCCCCGG CGCGGGGACC CTGCTCAACG TGGTCGCGGT GCTGATGGGG TCCGCGGCGG GCATCGCCTT CGGTTCCCGG TTGCCGCAGC GCATCCACGA CGTCGTCACG GACGGGCTGG GGCTGGTGAC GCTGATGATG GCGGGTCTGT CGGTGGTGGC GGTCACCTCG CAGGACCTGG TCGCTGCCGT GGGGGAGGGG GTCCCCGTGT TGTTGGTGCT CGGCGCGCTG CTGATCGGTG GCGTGACGGG CTCGGCCCTG CAGATCGAGC GGCGCATGGA GGGGGTGGCC GGGTGGCTGC AACGGCGCCT GGACCGGACG GGCGTGCAGG ACGTCCTGGC CGAGGGGGGC GAGGACGGCC CCGGCCCCGA TGGGGCGAAC GCGCAGGAGC CTGATCACGA GGCCACGCCG CAGGAGCGCT TCGTGCAGGG GTGGACCTCG GCGTCCCTGC TCTTCTGCGT GGGGCCGTTG ACGGTGTTGG GGGCCCTGAG CGACGGCCTG GGACTGGGCA TCGAACAGCT CGCGCTGAAG TCCGCCCTGG ACTTCTTCGC GGCGCTGGCC TTTGCCTCGG CCTTCGGCGT CGGGGTCGTG TTCTCCGCCC TGTCGGTCCT CGTGGTGCAG GGGCTCCTGA CGCTGGTGGG CCGGCTGGCA GGGGAGGTGG TCCCCCTGTA CGCCGTTGAC GTCATGACCG CGGCGGGTGG CTTGTTGCTC ATCGGGATCG CCCTGGGGTT GCTGCGCATC CGCACCGTTC CGGTGGGGGA CCTGCTCCCA GCCCTCGTGG TCGCGCCGGT GCTGGCCTGG TGCGTCACGC TGGTGTGA
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Protein sequence | MDGLFPGAGT LLNVVAVLMG SAAGIAFGSR LPQRIHDVVT DGLGLVTLMM AGLSVVAVTS QDLVAAVGEG VPVLLVLGAL LIGGVTGSAL QIERRMEGVA GWLQRRLDRT GVQDVLAEGG EDGPGPDGAN AQEPDHEATP QERFVQGWTS ASLLFCVGPL TVLGALSDGL GLGIEQLALK SALDFFAALA FASAFGVGVV FSALSVLVVQ GLLTLVGRLA GEVVPLYAVD VMTAAGGLLL IGIALGLLRI RTVPVGDLLP ALVVAPVLAW CVTLV
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