Gene Ksed_20880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20880 
Symbol 
ID8373592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2153667 
End bp2153975 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content62% 
IMG OID644992337 
ProductSSU ribosomal protein S10P 
Protein accessionYP_003149847 
Protein GI256825887 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.0503549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAC AGAAGATCCG CATCCGGCTG AAGTCGTATG ACCATGAGGT CATCGACTCC 
TCGGCGCGGA AGATCGTGGA CACCGTGACC CGTGCGGGCG CGACCGTGGT GGGCCCTGTG
CCCCTCCCGA CGGAGAAGAA TGTCTTCTGC GTCATCCGGT CCCCGCACAA GTACAAGGAC
AGCCGAGAGC ACTTCGAGAT GCGGACGCAC AAGCGTCTGA TCGACATCGT GGACCCGACC
CCCAAGGCCG TGGACTCCCT GATGCGTCTC GACCTGCCGG CTGACGTGAA CATCGAGATC
AAGCTGTGA
 
Protein sequence
MAGQKIRIRL KSYDHEVIDS SARKIVDTVT RAGATVVGPV PLPTEKNVFC VIRSPHKYKD 
SREHFEMRTH KRLIDIVDPT PKAVDSLMRL DLPADVNIEI KL