Gene Ksed_20870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20870 
Symbol 
ID8373591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2152999 
End bp2153658 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID644992336 
ProductLSU ribosomal protein L3P 
Protein accessionYP_003149846 
Protein GI256825886 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.235842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGA ACACCATGCA GCGCACCGTC GCCGGCGTTC TGGGCACGAA GCTCGGCATG 
ACCCAGGTCT GGGACGAGGA CAACCGTCTC GTGCCCGTGA CCGTCGTGCA GGTCGCCCCG
AACGTGGTGA CGCAGATTCG CACCCAGGAC ACCGACGGCT ACGGCGCCGT CCAGATCGCC
ACCGGCGACA TCGACCCCCG CAAGGTCAGC AACCCCCTGC GCGGTCACTT CGAGAAGGCC
GGCGTCACGC CGCGTCGTCA CGTGACCGAG CTGCGCACTG CTGACTCGGG TTCCTACGAG
CTGGGCCAGG AGCTCACCGT GGAGACCTTC GAGAACGGTG CGACGGTCGA CGTCACCGGC
ACCACCAAGG GCAAGGGTTT CGCCGGTGTC ATGAAGCGCC ACGGGTTCGC TGGTGTCAGC
GCCTCCCACG GTGCGCACCG CAACCACCGC AAGCCCGGTT CCATCGGTGG CTGCGCCACC
CCCGGTCGCG TCTTCCGCGG CACCCGCATG GCGGGTCGCA TGGGCGGCGA GCGTCAGACC
ACCCAGAACC TCACGATCCA CGCCGTGGAC GCCGACAAGG GCCTCCTGCT GATCAAGGGT
GCCGTCCCCG GCGCCCGTGG CGGCCTGGTC CTCGTGCGCT CCGCCGCGAA GGGAGCCTGA
 
Protein sequence
MTENTMQRTV AGVLGTKLGM TQVWDEDNRL VPVTVVQVAP NVVTQIRTQD TDGYGAVQIA 
TGDIDPRKVS NPLRGHFEKA GVTPRRHVTE LRTADSGSYE LGQELTVETF ENGATVDVTG
TTKGKGFAGV MKRHGFAGVS ASHGAHRNHR KPGSIGGCAT PGRVFRGTRM AGRMGGERQT
TQNLTIHAVD ADKGLLLIKG AVPGARGGLV LVRSAAKGA