Gene Ksed_20840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20840 
SymbolrplB 
ID8373588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2151118 
End bp2151954 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content70% 
IMG OID644992333 
Product50S ribosomal protein L2 
Protein accessionYP_003149843 
Protein GI256825883 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCC GCAAGCACAA GCCCACGACC CCGGGCCGCC GCGGCTCGAG CGCCGCGGAC 
TTCGTCGAGG TCACGCGCAG CACCCCCGAG AAGTCGCTGG TGCGTCCGCT GACCAAGTCC
GGTGGCCGCA ACGCCTCCGG CCGCATCACC ACCCGGCACA TCGGTGGTGG TCACAAGCGC
GCTTACCGTC TGATCGACTT TCGTCGGGCA GACAAGGACG GCGTGCCGGC GAAGGTCGCC
CACATCGAGT ACGACCCCAA CCGCACGGCG CGCATCGCGC TGCTGCACTA CGCAGACGGC
GAGAAGCGCT ACATCATCGC GCCGCGCAAC CTCGCGCAGG GCGCCCAGGT GGAGTCCGGC
CCTACGGCCG ACATCAAGCC GGGCAACAAC CTGCCGCTGC GCAACATCCC CGTCGGCACG
GTGATCCACG CGATCGAGCT CCGCCCCGGT GGCGGCGCCA AGATCGCCCG GTCGGCCGGT
ACCCGCGTGC AGCTCGTCGC CAAGGACGGC CCCTACGCCC AGCTGCGTAT GCCGTCCGGC
GAGATCCGCA ACGTGGACGC CCGCTGCCGC GCCAGCATCG GCGAGGTCGG CAACGCCGAG
CAGTCGAACA TCAACTGGGG CAAGGCCGGC CGCATGCGCT GGAAGGGCAA GCGCCCGTCC
GTGCGTGGTG TCGTGATGAA CCCGGTCGAC CACCCGCACG GTGGTGGCGA GGGTCGTACC
TCGGGTGGCC GTCACCCGGT GAGCCCCTGG GGCAAGCCGG AGGGCCGCAC CCGCAAGAAG
GGCAAGGGCA GCGACAAGAT GATCGTTCGC CGCCGCCGCA CCGGCAAGAA GCGCTGA
 
Protein sequence
MAIRKHKPTT PGRRGSSAAD FVEVTRSTPE KSLVRPLTKS GGRNASGRIT TRHIGGGHKR 
AYRLIDFRRA DKDGVPAKVA HIEYDPNRTA RIALLHYADG EKRYIIAPRN LAQGAQVESG
PTADIKPGNN LPLRNIPVGT VIHAIELRPG GGAKIARSAG TRVQLVAKDG PYAQLRMPSG
EIRNVDARCR ASIGEVGNAE QSNINWGKAG RMRWKGKRPS VRGVVMNPVD HPHGGGEGRT
SGGRHPVSPW GKPEGRTRKK GKGSDKMIVR RRRTGKKR