| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_20550 |
|---|
| Symbol | |
|---|
| ID | 8373559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 2132506 |
|---|
| End bp | 2133399 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644992304 |
|---|
| Product | pseudouridylate synthase I |
|---|
| Protein accession | YP_003149814 |
|---|
| Protein GI | 256825854 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 0.703936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.499894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGGTCA TCACGGTGGC GCACGCGGCC GTCTCGTGCG CCGGTACCCT CGCGCCCATG
CCGCGCCTTC GCCTCGACTT CGCCTACGAC GGCCGTGACT TCCACGGGTG GGCCACCCAA
CCGGGGCTGC GGACGGTGCA GGAGACGCTC GAGCGTGGCC TCGCCACCGT CCTGCGCGCG
CAGGATGTCT CGCTCACCGT GGCCGGGCGG ACCGATGCGG GCGTGCACGC CACCGGTGCC
GTGTGCCACC TGGACGTGGC CCACGCGGCG TGGGCTGCGG TGCCCGGGCG TTCCGACCGG
GCCCCGGCCG AGGCGCTCGT GACCCGCTTG GCCGGAGTGC TTCCTGCGGA CCTGGTCGTC
CACCGCGCCA CCGAGGTCCC CGACGCCTTC GACGCGCGCT TCTCCGCCCT GCGGCGTCAC
TACCGCTACC TGCTGTGCGA CCGGCGAGAG ACCCTCGATC CCCGGCGGCG CGGAATGGTC
GTGGCGTGGC GCAAGCCCCT GGACGCCGAG GCCATGCACG CCGCCGCACA GCAGCTCGTG
GGGTTGGGGG ACTTCGCCGC GTTCTGCAAG CCGCGCGAGG GGGCCACCAC CGTGCGCACC
CTGGAGCGCT TCACCTGGCA CCGGGATGAG CAGGGCTGGG TGGTGGGGGA GGTCTCGGCC
GACGCCTTCT GCCACTCGAT GGTGCGGGCT CTCGTGGGGG CAGTCGTGCC CGTGGGCGAG
GGGCGGCAGC CCGTCGACTG GCCCCGGCAG GTGCAGGAGG GTCGTGAACG GCTCGGGGCG
GTGCAGGTGA TGCCGGCGCA CGGCCTCACC CTGGTGGCGG TGGACTACCC GCCGGACGAG
GAGCTCGCCG CCCGTTCGGC CGAGAGCCGC GCGATGCGGG CGCCGCTCGC CTGA
|
|---|
| Protein sequence | MWVITVAHAA VSCAGTLAPM PRLRLDFAYD GRDFHGWATQ PGLRTVQETL ERGLATVLRA
QDVSLTVAGR TDAGVHATGA VCHLDVAHAA WAAVPGRSDR APAEALVTRL AGVLPADLVV
HRATEVPDAF DARFSALRRH YRYLLCDRRE TLDPRRRGMV VAWRKPLDAE AMHAAAQQLV
GLGDFAAFCK PREGATTVRT LERFTWHRDE QGWVVGEVSA DAFCHSMVRA LVGAVVPVGE
GRQPVDWPRQ VQEGRERLGA VQVMPAHGLT LVAVDYPPDE ELAARSAESR AMRAPLA
|
|---|
| |