Gene Ksed_20500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20500 
Symbol 
ID8373554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand+ 
Start bp2128258 
End bp2128872 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content74% 
IMG OID644992299 
Productcarbonic anhydrase 
Protein accessionYP_003149809 
Protein GI256825849 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.196424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.646859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACG ACTCCCCCAC CCCCGCGGAG GCCTGGGCCA CGATGCTGGA GGGCAACGCC 
CGCTTCGTGG CCGACGCCCC CCAGCACCCC AACCAGGACG CGGCCCGGCG CGCCACCCTC 
ACCGCCGGCC AAGCCCCCTT CGCCACCGTC TTCGGCTGCG CGGACTCCCG GGTGGCGGCC 
GAGATGATCT TCGACCGCGG CATCGGCGAC CTGTTCGTCA CCCGCACCGC CGGCCAGGTG 
ATGGACTCCG CGGTGCTCGG CACGCTCGAG TTCGGCAGCC ACGTGCTGGG GATCCCCCTC 
ATCGTGGTGC TGGGCCACGA CTCGTGCGGC GCCGTGAGCT CCGCCCTGGA CGCCCACGCC 
ACCGGCACCC TGCCCCCGGG CCACCTGTCG GACGTCGTGC AGAAGGTGAC CCCCAGCGTG 
CTGATGGCGC ACCGCGCCGG GGTGACCGAC GCCCGGGGCG TGATGGAGCA TCACGTGGCC 
GCCACGGTGG ACCTGCTGCC GGAGCGCTCC CGCCTCATCG GCGAGCGCCT GGAGGACGGC 
ACGCTCGGCA TCGTCGGGGC GGCCTACGAC CTCGCGAACG GCACCATCCG CGAGGTGGCC 
CGCCAGGGGC TCTGA
 
Protein sequence
MQDDSPTPAE AWATMLEGNA RFVADAPQHP NQDAARRATL TAGQAPFATV FGCADSRVAA 
EMIFDRGIGD LFVTRTAGQV MDSAVLGTLE FGSHVLGIPL IVVLGHDSCG AVSSALDAHA 
TGTLPPGHLS DVVQKVTPSV LMAHRAGVTD ARGVMEHHVA ATVDLLPERS RLIGERLEDG 
TLGIVGAAYD LANGTIREVA RQGL