Gene Ksed_20420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20420 
Symbol 
ID8373546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2120376 
End bp2120825 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content74% 
IMG OID644992291 
Productexodeoxyribonuclease VII, small subunit 
Protein accessionYP_003149801 
Protein GI256825841 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.672892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.487259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC AGCCCATCGG TGACGAGACC ACCGAGGCCC CAGAGACCAC CGAGCCGCAG 
ACCCCGGAGG CCGAGGCCGA CGACACGCAG GAGGCCCCTG ACAGCGCCGG GACCGAGGAC
GCCGCAGAGG GCCAGGCCGC CACCGGGGAC CAAAACACCA CCGGCGAGTC GGCGAAGGCC
CCAAAGGCGG CCCACACCGA CGTCGCGGGC CTGAGCTACG AGCAGGCCCG CGAGGAGCTG
GTCGGCATCG TGGCCACCCT GGAGCGCGGC GAGCGCCCGC TGGAGGAGTC CATGGAGCTG
TGGGAGCGCG GCGAGGCCTT GGCCGACCAC TGCGCCTCCT GGCTGGACGC CGCCCAGCAG
CGCATCACCG AGCGCGTCGA GTCACGGCAG GGCACCGCAG GCACCGCAGG CACCGTGTCG
AGCGCCGAGG GCGGTCCGTC AGCCGGCTGA
 
Protein sequence
MTEQPIGDET TEAPETTEPQ TPEAEADDTQ EAPDSAGTED AAEGQAATGD QNTTGESAKA 
PKAAHTDVAG LSYEQAREEL VGIVATLERG ERPLEESMEL WERGEALADH CASWLDAAQQ
RITERVESRQ GTAGTAGTVS SAEGGPSAG