Gene Ksed_20410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20410 
Symbol 
ID8373545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2119009 
End bp2120250 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content74% 
IMG OID644992290 
ProductExodeoxyribonuclease VII large subunit 
Protein accessionYP_003149800 
Protein GI256825840 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.586183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.574914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CCAGCACCTC CCTGCCCCAG AAGGCAGCGC AGACCACCGC TGAGGCACCG 
TGGCCGCTGC GCACCCTGGC CCGCAAGATC GACGAGTACG TGGACCGCAT GTCCGCCCTG
TGGGTGGAGG GCCAGCTGGT CGAGATCTCC CGCCGTGAGG GCGCACGGTG GGTCTGGATG
ACCCTGCGCG ACACCGACGC CGACTTCTCG ATGCGGGTGA TGGCGCCCCT GGGCGTCGTC
GACGGGGTCC AGCCCCCGCT GCAGCAGGGC GCCCGCGTGG TCATGCAGGC CAAGCCGCGC
TTCTACACCA AGAACGGGTC GCTCAGCCTG TCCTGCCGTG CCATCCGCCA CGTGGGGGTG
GGCGAGCTGC TCGCCCGCGT GGAGCAGCTC AAGAAGCAGC TGGCCGCCGA GGGCGTGTTC
GATGCGGGGC GCAAGCGCGC CCTGCCCTTC CTCCCCCGCC GCGTGGGTCT GGTGTGCGGC
CGCAACTCGG CCGCGGAGAA GGACGTGGTC GAGAACGCCC GGCGGCGGTG GCCGGCCACC
GAGTTCGTCA TCCAGAACGT CGTGGTGCAG GGTCCGGGAG CCGTGACGGC CGTGATCGCC
GCCGTCGAGG AGCTGCAACG CACCCCGCAG GTGGACGTCA TCATCATCTC GCGCGGCGGG
GGGAGCTTCG AGGACCTGCT GCCCTTCAGC AACGAGGCCA TGATCCGGGC GGTGGCGGCG
TGCCCGGTGC CCACCGTGAG CGCCATCGGC CACGACGTGG ACACCCCGCT GCTGGACCTC
GTGGCCGACG TCCGTGCCTC CACGCCCACC GACGCCGCCA AGCTGGTGGT GCCCGACGCC
GCCGCGGAGG AGCGGGGGAT CACCCAGGGC CGGGAGCGCC TGCGCCGCGC CCTGACCGGC
CGGCTGGCGG CGGAGCGGCA GGGCCTCACG GCGGTGCGGC AGCGGCCGGT GATGGCCGAC
CCGACGGTGA TGGTGACCCG GCCCCGGGCC GAGCTCGAGC GGGCCCGCCA GGCCGGCGAG
CGGGCGCAGG CCCGGCGACT CACCGGCGAG CAGCAACGGG TGACCGCCAC CCGCGGCCAC
CTGCGCGCCC TCAGCCCCCT GGGCACCCTG GAGCGCGGGT ACTCGGTGCT GCGCACCCCC
GACGGGCACG TGGTGACCTC CCGCGACGAG GTCGAGGCCG ACCAGTTGCT CCGCGTCACC
GTGGCCGATG GCGACTTCGC CACCCGGGTC CTGGGCGGCT GA
 
Protein sequence
MSQPSTSLPQ KAAQTTAEAP WPLRTLARKI DEYVDRMSAL WVEGQLVEIS RREGARWVWM 
TLRDTDADFS MRVMAPLGVV DGVQPPLQQG ARVVMQAKPR FYTKNGSLSL SCRAIRHVGV
GELLARVEQL KKQLAAEGVF DAGRKRALPF LPRRVGLVCG RNSAAEKDVV ENARRRWPAT
EFVIQNVVVQ GPGAVTAVIA AVEELQRTPQ VDVIIISRGG GSFEDLLPFS NEAMIRAVAA
CPVPTVSAIG HDVDTPLLDL VADVRASTPT DAAKLVVPDA AAEERGITQG RERLRRALTG
RLAAERQGLT AVRQRPVMAD PTVMVTRPRA ELERARQAGE RAQARRLTGE QQRVTATRGH
LRALSPLGTL ERGYSVLRTP DGHVVTSRDE VEADQLLRVT VADGDFATRV LGG