Gene Ksed_20290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20290 
Symbol 
ID8373533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2109117 
End bp2109950 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content62% 
IMG OID644992279 
Productpredicted transcriptional regulator 
Protein accessionYP_003149789 
Protein GI256825829 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0400625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.347976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC TGATGACGAT TGGGGAGTTC GCGGCGGCCA CATGGCTGTC GCCGAAGGCG 
CTCCGGCTCT ACGACCGGAA CGGTCTTCTC TCGCCCGATG CGGTCGATCC GTTCAATGGC
TATCGGAAGT ACAGCCACTC TCAGATCGAA GTCGCCCGTC TCGTCACCAT GCTCCGGCGC
ATCGACATGC CCCTTGACCA GATCAGGGAG CTGCTGGGAC TGCCTGAAGA TGAAAGATCA
GCCTTCGTAA CGCGTTATCG GGAAGCCGAA GCGGAGCGGC ACGCACGTCG CCAATCCCTG
GCTCGCTTCA TCGAGCACGC GGTCGCAGAG GGCTCGTTGG ACGGACACGG CCAGCCTGGA
TCCTCCCGGT TTGAGGTATC GCTGCGAACC GTTCCAGACA GCGCGGTTCT GACATCGACC
CGGCACACGT CCGCTCGCGA GCTGCCTGAT GTCATTCGCT CCAGTGCAGC GAAACTCCTG
CAGCTCGCGG ACGGACGCGG CGGTGCAATC GGTGGGCTCG TCGTGATCTA CCACGGCCAA
GTCGGCTGGG AGTCCGACGG GCCCATCGAG GTCTGTGTGC CGCTCCGCGA CGCGGAGCGT
GCCCATCGAG TGGAACGCAA GCATTTGCAG CTGTTCACTC GCGTCGTTTC CGAGGATGTG
CAGTTCCCCA GGATTCTCGC GGCGTTCGAA GCGGTCCAGA TGCGTGCTCG TCAACTCGGT
TTCGCCCATG CGGGACCGCC GCGAGAAATC TACACGCCAG ATAGTCAAGA CTCGGTGCCG
CGATGTGAGG TTGCATTGCC GGTCACCACA AATGAAGGAC AGTTGAGCAT ATGA
 
Protein sequence
MADLMTIGEF AAATWLSPKA LRLYDRNGLL SPDAVDPFNG YRKYSHSQIE VARLVTMLRR 
IDMPLDQIRE LLGLPEDERS AFVTRYREAE AERHARRQSL ARFIEHAVAE GSLDGHGQPG
SSRFEVSLRT VPDSAVLTST RHTSARELPD VIRSSAAKLL QLADGRGGAI GGLVVIYHGQ
VGWESDGPIE VCVPLRDAER AHRVERKHLQ LFTRVVSEDV QFPRILAAFE AVQMRARQLG
FAHAGPPREI YTPDSQDSVP RCEVALPVTT NEGQLSI