Gene Ksed_20260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20260 
Symbol 
ID8373530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2106850 
End bp2108022 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content74% 
IMG OID644992276 
Producthypothetical protein 
Protein accessionYP_003149786 
Protein GI256825826 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.140887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.2743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGG ACCCCACCAC CCTCCTGCCC GTGCTGCTCG TCTGCGCCCT GGCCCTGCTG 
GCCCTCGGGA CGCTGCTCGG CTGGTGGGCC CGGGGCGCGC GAGGATCCAC CCAGCTGGCT
GTCCTGCGGG AGCGTTCGCG GTCCCTGCAG GAGCGGGCCG AGCGGGCGGA GACGAGCCTG
CAGGAGCGCG AGGCCGAGGC CGCCTCCAGC GCCCGCGTCC TGGAGGCCGT CACGCCGGTG
CAGCGCAGCC TGGAACGGAT GGAGCGGCAG GTCACCGCCC TGGAGCGCGA CCGGGTGGAG
CAGTTCGGGG AGGTCGGCGA GCGGCTGCGA CACGTGGCCG CCTCCACCGA ACGCCTCGAC
GCAGCGACCA CCTCCCTGGC CGGGTCGCTG GCCTCCAGCG GGGTGCGCGG CACCTGGGGG
GAGACCCAGC TGCGGCGGCT GGTCGAGCAC GCGGGGATGC TCGCCCGGGT GGACTTCGAC
GAGCAGGTCC GCGCGGTGAG CGACCACGAC CGCGAGGTGC GCCCCGACAT GGTGGTGAAC
CTCCCTGACG ACCGGGTCGT GGTGCTGGAC GCCAAGGCCC CGATGACCGC CTTCCTCACC
GCCCAGGAGG TCGACGAGGC CGACCGGCCC GGGCTGCTCA CCCAGCACGC CAAGGCCCTG
CGCCAGCACG TCGACACCCT GTCCGGGAAG GCCTACTGGA GCGCGTTCCG CCGCACCCCC
CAGTTCGTGG TCTGCTTCGT CCCCACCGAC GCCACCCTGG CCGCCGCGCT GCAGGCCGAC
CCGGCGCTCT ACGACGACGC CCTGGCCAAG GAGGTTGTGC TCGCCTCGCC GGCCACCACG
ATGGCGCTGC TGCGCACCGT GGCGCTCACC TGGCAGCACG ACACCGTCGA GCGCAACGCC
GAGGAGGTGC TGCTGCTCGG CCGCCAGCTC CACGAACGGC TGGCCACCAC CGCCGGGCAC
CTGGACCAGA TGGGCCGCCA GCTCACCCGC ACCGTCGAGA GCTACAACCA GCTGGTGGGC
GGCCTCGAGT CGCGGGTCCT GGTCAGCGCC CGGCGGTTCA CCGACCTCGG GCTCCCGGGT
GAGGAGCTGC CGCACGCGCC GGGGGTCACC GCCGCAGCGC GCCCGCTGAC GGCGCCCGAA
TTGACCGCCC GAACTGACCG CCCGAACGAA TAA
 
Protein sequence
MSEDPTTLLP VLLVCALALL ALGTLLGWWA RGARGSTQLA VLRERSRSLQ ERAERAETSL 
QEREAEAASS ARVLEAVTPV QRSLERMERQ VTALERDRVE QFGEVGERLR HVAASTERLD
AATTSLAGSL ASSGVRGTWG ETQLRRLVEH AGMLARVDFD EQVRAVSDHD REVRPDMVVN
LPDDRVVVLD AKAPMTAFLT AQEVDEADRP GLLTQHAKAL RQHVDTLSGK AYWSAFRRTP
QFVVCFVPTD ATLAAALQAD PALYDDALAK EVVLASPATT MALLRTVALT WQHDTVERNA
EEVLLLGRQL HERLATTAGH LDQMGRQLTR TVESYNQLVG GLESRVLVSA RRFTDLGLPG
EELPHAPGVT AAARPLTAPE LTARTDRPNE