Gene Ksed_20250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20250 
Symbol 
ID8373529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2105981 
End bp2106670 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content74% 
IMG OID644992275 
Producthypothetical protein 
Protein accessionYP_003149785 
Protein GI256825825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.78263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.344053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG AACGGTTCGG ACCTTGGGCG GCGGTGTTCC GCGGCAGGGG GGCGGTGCCC 
GGGTGTGCCG AGACAGTCGC GGCCATCCTG GAGCCGCTGG GCGTGTGGTG CCACTACGTC
GGGCCCGGCG AGGAGATGAG CCTGGGGGAG GCACTGGCCA AGGGTCCGCT GGTGCTGGCC
CACCCCGGCG GGGGCACGGT CCAGGACGAG TGGGAGCGGA TCGGCCCCGA TGTCGACCTC
GTCGCCCCCT ACGTGGCCGG CGGGGGCGGG TACCTCGGCT TCTGCCTCGG CGCCTACCTC
GCCGGGCAGG GGCCGGGCTA CGGGATCATC CGTGGCGGTG GCGACACCGA CCAGTGGTTC
CGGCGGCCCG GGGCCGACGT GACGCACGGT GACCCTGCCA CGACGACGAT CCAGTGGCGG
GGCCAGTGGC GCGAGGTGTT CGTCCAGGAC GCGCCGGTCC TGCTCGTCGA CGAGCAGGAC
CCCTGGATCC GGGTCCTCGC CCGCTACGTC AACGGCGACG TGGCGGCGAC CCTCTCCCGG
TGGGAACGGG GGTGGGTCGG TCTGACGGGC CCGCACCCGG AGGCGACCGT CGACTGGTAC
ACCGACGCCG GTCTCGAGCC CCCGCAGAAC TCCACCCGGG ACCTGGCCAT GGACCTGGCC
ACCGCGGTGA CGGGTCTCGT CGGACGGTGA
 
Protein sequence
MSTERFGPWA AVFRGRGAVP GCAETVAAIL EPLGVWCHYV GPGEEMSLGE ALAKGPLVLA 
HPGGGTVQDE WERIGPDVDL VAPYVAGGGG YLGFCLGAYL AGQGPGYGII RGGGDTDQWF
RRPGADVTHG DPATTTIQWR GQWREVFVQD APVLLVDEQD PWIRVLARYV NGDVAATLSR
WERGWVGLTG PHPEATVDWY TDAGLEPPQN STRDLAMDLA TAVTGLVGR