Gene Ksed_20240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20240 
Symbol 
ID8373528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2105328 
End bp2105984 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content78% 
IMG OID644992274 
Productphosphopantetheinyl transferase 
Protein accessionYP_003149784 
Protein GI256825824 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.457733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGAC GCCTCCGCGT GGAGGTGCTC TGGACACCGG TGGGGGCCGA CCCCCATGCC 
CGACGGGAGG CCGGCTGGAG GCTGCGTGAC CTCCTGCTGG CCCGTCGCCT GGGGGTGCCG
CAGGCCCGGC TCCCGGCGCC GGTGCGCTCC TGCGAGTGGT GCGGTGGTCC CCACGGGCGC
CCTCGCCTCC CCGGTGGCGC CGTCCAGTTC AGCACCTCCC GCGCCCCGGA CGGTCAGGGT
GGCTGGGTCG TCGCGGTGGC CGCGACCGAC GCGAGGTGGT GGGGTCGGGT GCCGGCCATC
GGCCTGGACC TCGTCGGACC GTGCGGGGAC GTGCCCCGGC CGGCGGACGT GTTCAGCCCA
CGTGAGCTGG AGTCAGGCCC GGCAACGGGG CTCGCCGGGG TGCGGAGGGC GTTCGCCCGC
AAGGAGTCGG TGCTCAAGGC GGCCGGCTGC GGGCTGGCGG TCCCCCTGTC CGCGGTGACC
GTGACCGGTG CCCGTGGCGG GTCGGGCGAG TGGGTGGCAC GCCTGCCGCG GGTGCCCTCC
CTGCGGGGGC AGGACGTCGC CGTGGGCTCC TGTGTCGGTG CGGTGGCCGT GCTGGGCAGC
CGGTGGGGCC GCCGCCCGCG GGTGGCGGCC GAGGTCCGGC GGCACGACCT CTGCTGA
 
Protein sequence
MTRRLRVEVL WTPVGADPHA RREAGWRLRD LLLARRLGVP QARLPAPVRS CEWCGGPHGR 
PRLPGGAVQF STSRAPDGQG GWVVAVAATD ARWWGRVPAI GLDLVGPCGD VPRPADVFSP
RELESGPATG LAGVRRAFAR KESVLKAAGC GLAVPLSAVT VTGARGGSGE WVARLPRVPS
LRGQDVAVGS CVGAVAVLGS RWGRRPRVAA EVRRHDLC