| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_20220 |
|---|
| Symbol | |
|---|
| ID | 8373526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 2103217 |
|---|
| End bp | 2104464 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644992272 |
|---|
| Product | drug resistance transporter, Bcr/CflA subfamily |
|---|
| Protein accession | YP_003149782 |
|---|
| Protein GI | 256825822 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.179817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCAC CCTCCTCCGC GCCGACCCCG GGGCCTTCCG CCGCCTCGGC CCCGGCCGGG
CGCGACTACC TCCAGCTGGT CCTCGTCCTC GGCGCGCTCA CCGCGCTGGG GCCGCTGACG
ATCGACACCT ACCTGCCGGC GCTCCCGGCC ATCCAGGACG AGCTGCTCAC CACGCAGGCG
GCGGTCCAGC TGACCCTCTC GGGCACCCTG CTGGGGATGG GACTGGGCCA GCTCGTGAAC
GGCCCGGCCT CCGACGCCTT CGGTCGGCGG CGACCGCTGC TGGTGGGGCT GGCCCTCCAC
GTGGTGGCCT CCCTGCTCTG TGCCACGGCC ACCTCGGTGA CGGTGCTCGC CGCGGCCCGG
TTGCTCCAGG GGCTGGCGAC CTCCGCGGTG TCGGTGACCG CGATGGCGAT GGTGCGGGAC
CACTTCGCCG GCCGGGCGGC GGCGCGCACG ATGAGCCACC TGGCCCTGGT CAACGGTGCG
GCACCGGTCC TGGCCCCGAC CCTGGGCGGG CTGATCCTCA CCCGCACCGA CTGGCGCGGG
GTGTTCCTCG TGCTCGGCGG GATCGCCCTG GTGCAGCTCC TGCTGGCCGC CCTCTTCCTC
CGCGAGAGCC TGCCCCCGCA GCGGCGTCGC TCGCTGCGCC CCGCGGCGCT CCTGGGCACC
TACCGGGGGA TCCTCTCCGA CCCGGACTTC CTCCTCCTGG CCGCCACCGC GGGGCTGATG
TTCGCCGCCA TGTTCAGCTA CATCTCGGGG GCGAGCTTCG TGCTGCAGGG TGGCTTCGGC
CTCAGCGAGC AGCAGTTCGG GCTGGCCTTC GGCGCCAACG CGGTGGGGCT GGTGGTCCTG
GCGCAGGTCA ACGGGCGGGC CGTGCAGCGC TGGCACCCGC TGCGGCTCCT CACCACCGGC
ATCACGATGG GCGTGACCGG GGCGCTGGGG GTCGTGCTCT GCGCGCTGCT CGGCATCGGT
GGTCTGTGGG GCGTGGTCGT GCCGCTCTTC GTGGCGGTCT CGGCCGGCGG GCTGAGTTTC
CCCAACGGGC CGGCGCTGGC CCTGACCCGG CACGGGGAGG CGGCCGGCTC GGCTACGGCG
GTGCTCGGGG CGCTGCAGTT CAGCATCAGC GGGGTGACCA CCCCGCTGGC CGGGCTTCTG
CCGGGGGAGG GGGCGCTCCC GATGGGGCTG GCGATGCTGG CGTGCACCTC GGCGGCCGCG
GTGTGCGTGA CCGTCCTCTG GCGGCGCGGG CGCGTGCTGG CGGACTGA
|
|---|
| Protein sequence | MTAPSSAPTP GPSAASAPAG RDYLQLVLVL GALTALGPLT IDTYLPALPA IQDELLTTQA
AVQLTLSGTL LGMGLGQLVN GPASDAFGRR RPLLVGLALH VVASLLCATA TSVTVLAAAR
LLQGLATSAV SVTAMAMVRD HFAGRAAART MSHLALVNGA APVLAPTLGG LILTRTDWRG
VFLVLGGIAL VQLLLAALFL RESLPPQRRR SLRPAALLGT YRGILSDPDF LLLAATAGLM
FAAMFSYISG ASFVLQGGFG LSEQQFGLAF GANAVGLVVL AQVNGRAVQR WHPLRLLTTG
ITMGVTGALG VVLCALLGIG GLWGVVVPLF VAVSAGGLSF PNGPALALTR HGEAAGSATA
VLGALQFSIS GVTTPLAGLL PGEGALPMGL AMLACTSAAA VCVTVLWRRG RVLAD
|
|---|
| |