| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_20140 |
|---|
| Symbol | |
|---|
| ID | 8373518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 2094476 |
|---|
| End bp | 2096362 |
|---|
| Gene Length | 1887 bp |
|---|
| Protein Length | 628 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644992265 |
|---|
| Product | heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting |
|---|
| Protein accession | YP_003149775 |
|---|
| Protein GI | 256825815 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0159818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.023133 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGC CGCCCCTCTG GCGGCGCCTC GAGGGCTCCC CCTGGACCAT CCCCGCCCTG
GCCGCGCTGC TCGTGGTCGT CTCGTGGACG CTGGGCTGGT CCGGGCGGGA CGGCGCGGCC
GACCTGGTCA TGCTGGCGGC CGCGGTGGTG GCGGGTCACC GCATCGCTCT CAGCGCCGTG
CGCGCGCTGC TCAACCGGGT GGTCGGGATC GACCTGCTGG TCACGGTCGC CGCCGTCGGT
GCCGTCCTGG TCGACAACTA CTGGGAGGCC GCGGCGGTGA CCACGCTGTT CGCGATCGGC
GGGGCGCTGG AGGCCATGAC CCTGGCCCGC ACCCGATCGG CCCTCTCCGA GCTGGTGGAC
TCCGCCCCGG ACATGGCCAT GGTGGTGCGT GAGGGTGTCG AGACCGAGGT CCCGGCCCAC
GAGGTCCGCC CGGACGAGGT GGTGATCATC AAGGCCGGTG GCATCGTGCC CGTCGACGGC
GAGGTCTTCG GCGGCCGGGC CGCGGTGAAC GAGGCCAGCA TCACCGGCGA GTCGATCCCG
GTGGAGAAGA CCGAGGGCGA CCCCGTCTAC GCCGGCACCG TCCTGACCGG GGGCCACGTC
CGGGCCCGGG CCGTCTCCAT CGGCGCCGAG ACCACTCTGG CCCGGATCAT CCGCCGGGTC
GAGGACGCGC AGGACGCCAA GGCCCGCACG CAGACCTTCA TGGAGCGCTT CTCCCGCTGG
TACACCCCGG GCATCGTCCT GATGGCCCTG GTGACCGGTC TGGTCACCAG GAACGTGGAG
CTGGCCCTGA CCCTGCTGGT CATCGGCTGC CCCGGCGCGC TGGTGATCTC CATCCCCGTC
GCCCTCGTGG CCGGGATCGG TCGCGGCGCA CGGTCCGGGG TGCTCATCAA GGGTGGTGAG
CACCTGGAAC GGGCCGCCAC CGTCGACGCG GTCGCACTGG ACAAGACCGG CACCCTCACT
GCCGGGGCGC CGGAGCTCAC CGACGTCGTC CCCGTGACCC CGGGGGTCGA CCGTGAGGAG
GTGCTCCGTG CCGCCGCTCT GGCCGAGGTG GGCAGCGAGC ACCCCCTGGC CGAGCCGATC
GTCCGCCGAG CCCGCCAGGA GGGCCTGCTC GTGGGGAGCC CCGAGGGTGA CTTCCGCCCC
GTGGTGGGGC ACGGCATCGT CGCCAGGGTC GAGGGGCGGA CCATCGCGGT GGGCAAGCCC
GAGCTGGGTG AGCAGGCATT CCCCGGCACC GACGCCACGG CCCTGCGGGA GCTCGTGGAC
GAGCTCGGGA GCCGGGGGCG CACGGCCATG GCCGTGGTCC GCGACGGAGA GCCGCTGGGC
GTGGTGGCCG TCGCCGACAC CCTGCGCCCC GAGTCCGCCG ACGTGGTGGA ACAGCTCCAC
CGCAGCGGTG TGAAGCGCGT GCTGATGCTC ACCGGTGACC GCGAGTCGGT GGCCAGGGCC
GTGGCCGCCG AGGTGGGTGA CCTCGAGGTC CACGCCGGCC TCCTGCCGGA GGACAAGCTC
GCCATCATCG AGCAGCTCCG GGCCGAGGGG CACCGGGTGG CCATGGTGGG AGACGGGGTG
AACGACGCCC CGGCCCTGGC GAGCGCCGAC ATCGGCATCG CGATGGGTGC AGCGGGCAGC
GGCCTCGCGG TGGAGACCGC GGACGTGGCC CTGATGGCCG ACCGCATCGA CCGGGTCGGC
GACGCCCTGG GCCTGGCCCG CTCCACGGTG CGCGTGATGC ACCAGAACAT CGTGATCGCC
CTGGTGACGG TGGCCCTGCT GCTGGCCGGT GTCTTCGCCG GCGGTGTGAC CATGAGTCTG
GGCATGCTGG TGCACGAGGC CTCGGTGCTG GTGGTCATCG TGAACGCGAT GCGCCTGCTG
CATCACGAGC CGTGGGGTCA CCGCTAA
|
|---|
| Protein sequence | MTRPPLWRRL EGSPWTIPAL AALLVVVSWT LGWSGRDGAA DLVMLAAAVV AGHRIALSAV
RALLNRVVGI DLLVTVAAVG AVLVDNYWEA AAVTTLFAIG GALEAMTLAR TRSALSELVD
SAPDMAMVVR EGVETEVPAH EVRPDEVVII KAGGIVPVDG EVFGGRAAVN EASITGESIP
VEKTEGDPVY AGTVLTGGHV RARAVSIGAE TTLARIIRRV EDAQDAKART QTFMERFSRW
YTPGIVLMAL VTGLVTRNVE LALTLLVIGC PGALVISIPV ALVAGIGRGA RSGVLIKGGE
HLERAATVDA VALDKTGTLT AGAPELTDVV PVTPGVDREE VLRAAALAEV GSEHPLAEPI
VRRARQEGLL VGSPEGDFRP VVGHGIVARV EGRTIAVGKP ELGEQAFPGT DATALRELVD
ELGSRGRTAM AVVRDGEPLG VVAVADTLRP ESADVVEQLH RSGVKRVLML TGDRESVARA
VAAEVGDLEV HAGLLPEDKL AIIEQLRAEG HRVAMVGDGV NDAPALASAD IGIAMGAAGS
GLAVETADVA LMADRIDRVG DALGLARSTV RVMHQNIVIA LVTVALLLAG VFAGGVTMSL
GMLVHEASVL VVIVNAMRLL HHEPWGHR
|
|---|
| |