| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_20100 |
|---|
| Symbol | |
|---|
| ID | 8373514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 2091891 |
|---|
| End bp | 2092904 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644992261 |
|---|
| Product | predicted membrane protein |
|---|
| Protein accession | YP_003149771 |
|---|
| Protein GI | 256825811 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2035] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.00191645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0169787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC AGATCGCGCA GGACGCCGCC CACGAGGCCC CGTCCCCCGG AGCACCCACC
GGTCGGCAGA CGCCGCTCGG CATCCTGCTC AACCTCGTCC GCGGGGTCCT CATCGGCATG
GCCGAGCTCG TCCCGGGGGT CTCCGGCGGC ACCGTCGCCC TGGTCACCGG GGTCTACGAC
GAGCTGCTCG ACTCCGCCGC CCACGTCCTG TCCGCCCTCA AGCGGCTGGT CCAGGGGCCC
GACCGGTGGA ATGGTTTCGT CGGTCAGCTG CGCCAGAGCT CGTGGGGCCT TCTGGTGCCG
GTCATGGCCG GCATGCTCGC GGCCGTCCTG CTGGCTGCCG GGGCCATGGC CGATCTCGTG
GTCGACCACC CCGAGCACGC CCGCGGCCTC TTCCTGGGGC TCGTGGTGGC CTCCATCGCG
GTCCCGCTCC TCATGGCCCG TGACAGCCGT CGCGACGACG AGGCCGCCGG GCGTCCCACG
CTCTCCCCGG TCGCCGCCGT GCTCGTCGTG GTCGTGGCCG CCGTCATCAG CTTCCTGCTG
GTCAGCATGG CCGGCGGGGA GACCCGGATG CAGCCGAACC TCCTCGTGGT CTTCCTCGCT
GCGGCGGTCG CCATCTGCGC GCTCGTCGTG CCGGGGGTCT CCGGCTCCTT CTTCCTGCTG
GCCATCGGCC TCTACGCCCC CACCATGGCC GCCATCGACG AGCGCGATCT CACCTACATC
GCCGTCTTCG GCCTCGGGGC GATGGTCGGG CTGGCCTCCT TCGTGCGTGT CATCCGCTAC
TTCCTGCTGC GCCACCGCCG GGTCACCCTG CTGGCCATGA GCGGGCTGAT GATCGGCTCC
CTGCGGGCGC TGTGGCCCTG GCAGGAGGTC GTCGGGGAGC ACGAGACCGG TGCCCTGACA
TCCCCGGCTG ACCCGGTGAC CGGGCCGGTC CTGCTGGCCT TCCTCGGCGC CGTGGTGGTC
ACGGCTCTGG TGGTGTTCGA GCGACGCTTT GGTACCCCGA CCCCCGGGGC CTGA
|
|---|
| Protein sequence | MTSQIAQDAA HEAPSPGAPT GRQTPLGILL NLVRGVLIGM AELVPGVSGG TVALVTGVYD
ELLDSAAHVL SALKRLVQGP DRWNGFVGQL RQSSWGLLVP VMAGMLAAVL LAAGAMADLV
VDHPEHARGL FLGLVVASIA VPLLMARDSR RDDEAAGRPT LSPVAAVLVV VVAAVISFLL
VSMAGGETRM QPNLLVVFLA AAVAICALVV PGVSGSFFLL AIGLYAPTMA AIDERDLTYI
AVFGLGAMVG LASFVRVIRY FLLRHRRVTL LAMSGLMIGS LRALWPWQEV VGEHETGALT
SPADPVTGPV LLAFLGAVVV TALVVFERRF GTPTPGA
|
|---|
| |