Gene Ksed_20090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20090 
Symbol 
ID8373513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2087736 
End bp2091770 
Gene Length4035 bp 
Protein Length1344 aa 
Translation table11 
GC content71% 
IMG OID644992260 
Productamino acid adenylation enzyme/thioester reductase family protein 
Protein accessionYP_003149770 
Protein GI256825810 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain
[TIGR02353] non-ribosomal peptide synthetase terminal domain of unknown function 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0150684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.025182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCTGC AGACGCCAAC CGAGCCGGAT CGTCTGAAGT CGCCCACCGA GCTGATCGAG 
CTCTCGGGCG TCCGCCCGCC CATGCAGGAG CGGATGCACC AGTACTTCGA GGCCAGTGTG
GACCGCGTTC CCCACCACGT GGCCCTGGAG CTCGAGGACC GGCGGCTGAC CTATGCGGAG
CTGGACGCGC TGGGCAACGC CCTGGCCCAC CACCTGCGGG ACCGGGGCGT CGAGCCCGGC
CAGCGCATCG GCCTGCTCCT GAACCGCTCG CTGGAGATGT ACGTCGGCCT GCTGGGCATC
ATGAAGGCTG GCTGCGCCTT CGTGCCGATC GACCCCGCCT CGCCCTCGGA CCGTGTGAGC
TTCATCTCCG AGGACAGCTC GCTGTCGATG CTGCTGTCCA CCTCCGGGAT CCCGGCGCAC
CACGCCAGCG CCGCCCCGGT GCTGCTGCTC GACGACCCGT CGACCCAGGA CGCGGTGGCC
GCGGCCCCGA CCACGCGGCC CGCCCCGGAC GGGCTCGACG ACCCGACGGC CTACATCATC
TACACCTCGG GCTCCAGCGG TCGGCCGAAG GGCGTGGACG TCGCCCAGAG CAGCATCGTC
AACTTCATCC ACGTCATCAC CGAGGTGTAC GACGTCCGGG AGACCGACCG CATCTACCAG
GGCATGACGA TCGCCTTCGA CTTCGCCATC GAGGAGGTCT GGCCCACCTG GGCGGCCGGC
GCGACCCTGG TGGCCGGCCC GACCGACGCT CGCCGCGTCG GGGCCGGGCT CACCGAGTTC
CTCGAGACCC GCGGGATCAC GATCCTCTAC TGCGTGCCCA CCGTGCTCTC GACCGTCGAG
CGCACCATCG ACTCGATCCG CTCGGTGATG GTCGGCGGCG AGGCCTGCCC GGCCGAGCTC
GTCGAGCGCT GGGCCCCCGG TCGGCGCATG CTCAACACCT ACGGACCCAC CGAGGCGACC
GTGACCTGCA CCTGGGGCGT CCTGCGGCCG GGTCGGGCGG TGACCATCGG TGTGCCCGTG
CCCACCTACA CCGCGACGAT CCTCGACGAC GACCGCCAGC CGGTGCCCTT CGGTGAGGTC
GGCGAGCTGT GCATCGGCGG CCCCGGTGTG GCCCGCGGCT ACATCAACCG CCCCGAGCTC
AACGTCGACC GGTTCATTCA GGACCCCGAG GGCTCCGGGG AGCGGATCTA CCGCACCGGT
GACCTGGCGC GCTTCCAGGA GGACGGCGAG ATCGTCTACC TGGGCCGCGC CGACGCCGAG
GTGAAGATCC GCGGCCACCG CGTGGACCTC GGTGAGATCG AGAGCGTGAT GATGCGCGAC
CCGCGGGTGC CCACCGCCGC GGTCAACTAC TGGCCCGACG GTGGTGGTGG CGACCTGGCC
GGCTACATCA CGGTGAACGA GGACGAGACC GACGTCGACG GCCTGCGGCA GAAGCTGTGG
GAGGACATGC GGGACACGCT CCCGTCCTAC ATGGTCCCCT CGTTCCTCGA GACCATCGAC
GAGATGCCGA TGCTGCCCAG CGGCAAGGTC GACCGCAAGG CCCTGCCTCG GCCGAGCACC
CCGCGCCTAG TCGGTGGCGG TGAGCACGTC CCGCCCGCGA CCCCGACCGA GGAGTGGATG
GCCGGGGTCT GGGCCGACGC CTTCGGGGTG GAGCCCGACC AGCTGTCCGT GCAGGCCAAC
TTCTTCGACG ACCTCGGTGG TCACTCGTTG GTCGCGGCCT CTCTCGTCTC CCGTCTGCGC
GAGGACCCGC GAGGGGCCCA GCTGTCGGTG ATGGACCTCT ACGCCACGCC CACCGTCCGC
GGCATGGCCG GCACCCTCGA CGAGAGCGGG GCCACCGAGG ACGTGGGCGA GGCCCTCACC
ACCGAGCCGA TCGAGCACGC CTCGACGGGC CGGATCTGGC TCTTCGGCCT GGCCCAGGCC
GTGGCCGTGC TGCTCATGCT CATGGTCGCC ATGTCGCCGG TGGCCCTCGC CTACTGGTGG
TACTCGGGTG TGCCGTCGAT CAGCCTGCTG CAGCTCATGG CGGTCTCGCT GCCGATCTCC
TACCTGGGAA CCCGCTGGGT CGGCCCGCTC GTCGTGGCCC GCCTGCTGGG CGACGTGAAG
CCGGGCAGCT ACCCGCTCTA CTCGATGGAG CACCTGCGGG TGTGGATGGC CGGCCGGGCC
ATGGAGCTCT CCCCGATGAA CCACCTCGCC GGCTCGGCCC TGGCCGCGCC CTACCTCCGG
CTGGCCGGCG CCCGGGTGGA CGACTCCGCC CACGTCGGGA CGCCGATCAC CACCCTGCCC
GCGCGGGTGA CGATCGACGC GGGGGTCGCG ATCGGGTACG CCACCCGCCT GGACGCCTGG
TCGGTGTCCG GCGGTCGCAT CGAGGTGGGG GACATCCACC TGCGCGAGGA CTCCACCGTC
CTGGCCAACT CCGTGGTGGT CGCCCCCTGC GAGATCGGGA TCGGCGCGAT GGTGCAGGAG
CAGTCGGTCG TCGGCCCCGA CCTCACGATG CCCCCCGGCG AGGTCCGTGC CGGCTCGCCG
GCCACCGTGG TGCCCGCCCC CGGGGACGAC ATCGTCGTGA CGATGGCCGC CTGCGACCGA
GCGCCGCGCC GCTGGGGGCT GACCCAGGTC GTCGGCTTCG TGTGGGGCGT GCTCGGGCTG
GAGCTCCTCC CGATGCTGGC GCTGCTGCTG CCCGTGGTCC TGGTGTGGGC CACGCTCCTC
GCGGGCGGCG TCTGGTGGGG GCTGCTCGCC TCGCTGCTCA CCGGCCCCCT CTTCGTGGTG
AGCGCCTGCG CTCTCATCCT GGGGCTGCGG AACTTCGGCC TGCCCCGGAT GCCGGTGGGG
ATCCACCACC TGCGCTCCCA GCTGGGCGTC GACAAGTGGT TCGCCGACCG GCTCCTGGAG
GCCAGCCTCC TGCTCACCAA CAGCATGTAC TCGACGCTGT ACACCCCGCC GTGGCTCCGG
CTGCTGGGCG CCCGGGTGGG CAAGCGGGCC GAGGTGTCCA CGATCGCCAA CATCGACCCC
AGCCTGCTGA CCCTGCACGA CGAGTCGTTC GTGGCCGACA TGGCCTCGGT CGGCAGCGCG
ACCTACTGCC GCGGGCACGT CGCCTTCCGG CCCACCGAGG TCGGGGAGCG GGCCTTCGTC
GGCAACGCCG CCTTCGTCCC CTCGGGGTCG AAGATGGGGC AGGACAGCCT GCTCGGCGTG
GGGTCCACCC CGCCGGCCGC CGGCATCCAG CCCGGTGAGT CCTGGCTCGG CTCGCCCTCC
TTCTTCCTCC CGCAGCGCGA GATGTTCGAG GGCTACTCCG AGGAGGACAC CTACCGTCCC
TCGCGCAAGG TCGTGATCGG TCGCTATCTC ATCGAGTTCG TGCGCGCCAC GCTGCCGGGC
ACGCTGCTCG GTCTGTCCAC CTTCGCCACC CTCCAGGTGG CCTCGGCCCT GGCCTTCGCC
GAGCTGCCCG TGTGGGCCAT GATCATGCTC CTGCCGGCGG TGGCCATGCT CGCCGGACTG
GCCACGACGC TCTTCGTGGC CCTCATGAAG TGGGTGCTCA TGGGCCGCTA CCGGAAGCGC
GTCGAGCCGC TGTGGAGCCA GTTCGTGCGC GTCAGCGAGC TCGTCACGGG CGTGTTCGAG
GCCGCGGCGG TGCCGGTGCT GCTCATGCAC CTCCAGGGCA CCCCGATGCT CGGCCCGGTG
CTCCGCCTGT TCGGTGTGCG GGTGGGCCGC CACGCCCTGG TGGAGTCCAC CTACATCACC
GAGTTCGACC TGGTCTCGAT CGGGCGCCGT GCATACATCG GCCCCGCGGT CTCGCTGCAG
ACCCACCTCT TCGAGGACCG CGTCATGAAG ATGGACGAGG TGCGGGTCGC GGACGAGGCC
GAGGTCGGTG CCCGCTCCGT GGTCCTCTAC GGCTCCGACG TGCAGGAGAG GTCGCGCCTG
CGGGCCCTCT CGCTGGTCAT GAAGGGTGAG ACGACGCCGG CACGGACCGT CTGGCAGGGC
ATCCCGGCCC AGCCGGTCCG GGCCGCGGTC GAGGACGCCA CCACCGTTGA GAAGACCCTG
GAGGTCGCCC GATGA
 
Protein sequence
MALQTPTEPD RLKSPTELIE LSGVRPPMQE RMHQYFEASV DRVPHHVALE LEDRRLTYAE 
LDALGNALAH HLRDRGVEPG QRIGLLLNRS LEMYVGLLGI MKAGCAFVPI DPASPSDRVS
FISEDSSLSM LLSTSGIPAH HASAAPVLLL DDPSTQDAVA AAPTTRPAPD GLDDPTAYII
YTSGSSGRPK GVDVAQSSIV NFIHVITEVY DVRETDRIYQ GMTIAFDFAI EEVWPTWAAG
ATLVAGPTDA RRVGAGLTEF LETRGITILY CVPTVLSTVE RTIDSIRSVM VGGEACPAEL
VERWAPGRRM LNTYGPTEAT VTCTWGVLRP GRAVTIGVPV PTYTATILDD DRQPVPFGEV
GELCIGGPGV ARGYINRPEL NVDRFIQDPE GSGERIYRTG DLARFQEDGE IVYLGRADAE
VKIRGHRVDL GEIESVMMRD PRVPTAAVNY WPDGGGGDLA GYITVNEDET DVDGLRQKLW
EDMRDTLPSY MVPSFLETID EMPMLPSGKV DRKALPRPST PRLVGGGEHV PPATPTEEWM
AGVWADAFGV EPDQLSVQAN FFDDLGGHSL VAASLVSRLR EDPRGAQLSV MDLYATPTVR
GMAGTLDESG ATEDVGEALT TEPIEHASTG RIWLFGLAQA VAVLLMLMVA MSPVALAYWW
YSGVPSISLL QLMAVSLPIS YLGTRWVGPL VVARLLGDVK PGSYPLYSME HLRVWMAGRA
MELSPMNHLA GSALAAPYLR LAGARVDDSA HVGTPITTLP ARVTIDAGVA IGYATRLDAW
SVSGGRIEVG DIHLREDSTV LANSVVVAPC EIGIGAMVQE QSVVGPDLTM PPGEVRAGSP
ATVVPAPGDD IVVTMAACDR APRRWGLTQV VGFVWGVLGL ELLPMLALLL PVVLVWATLL
AGGVWWGLLA SLLTGPLFVV SACALILGLR NFGLPRMPVG IHHLRSQLGV DKWFADRLLE
ASLLLTNSMY STLYTPPWLR LLGARVGKRA EVSTIANIDP SLLTLHDESF VADMASVGSA
TYCRGHVAFR PTEVGERAFV GNAAFVPSGS KMGQDSLLGV GSTPPAAGIQ PGESWLGSPS
FFLPQREMFE GYSEEDTYRP SRKVVIGRYL IEFVRATLPG TLLGLSTFAT LQVASALAFA
ELPVWAMIML LPAVAMLAGL ATTLFVALMK WVLMGRYRKR VEPLWSQFVR VSELVTGVFE
AAAVPVLLMH LQGTPMLGPV LRLFGVRVGR HALVESTYIT EFDLVSIGRR AYIGPAVSLQ
THLFEDRVMK MDEVRVADEA EVGARSVVLY GSDVQERSRL RALSLVMKGE TTPARTVWQG
IPAQPVRAAV EDATTVEKTL EVAR