Gene Ksed_19960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19960 
Symbol 
ID8373500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2078297 
End bp2078998 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content75% 
IMG OID644992247 
Productmolybdopterin/thiamine biosynthesis dinucleotide-utilizing protein 
Protein accessionYP_003149757 
Protein GI256825797 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0117086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCTG ACGCGCTGCA GGACGACCAG TGGGCCCGGC AGCGGGTGCT GCTCGAGGAG 
GGCAACCGGG TGCTGCGGGC CTCCTCGGCG CTCGTCGTGG GCTGCGGCGG GCTGGGGGCC
GGGGCGATCC CCGCGCTCGT GGCCAGCGGG GTGGGGCGGG TCGTGCTCCT CGACGACGAC
GTCGTGGAGC TGAGCAATCT CAACCGGCAG ACCCTCTTCA CGCACGCCGA CCTCGGTGCG
CTCAAGGTGG AGCGGGTCGT GGCCCGCATG CGGGAGCTCT CGCCCGAGTC GCGGATCGAG
GGGGAGGTCC GCCGCCTCAC CGCACAGGAC GCCGAGTTCG TGCAGGGCTT CGACGTGGTG
CTCGACTGCA CCGACAAGGT CGCCTCCCGC ACGGCCATCT CGACGAGTTG CCGGGAGGCC
GGCGTGCCCT GGATCTGGTC GGCGATCGAC GGCTGGCAGG GCGTGCTCAG CGTGTTCGTC
CCCGGCGGGC CGCAGTGGGA GGACGCCAGC GCCATGCGCG AGGAGCTGCC CGCCCCGCCG
CAGATCCTCG GGGCCACCCC GGCGATGCTC GGTGCCTGGC AGGCCGCGGA GGCGGTCAAG
CTGCTCACCG GGCAGGGGCG GCCCCTGGTG GGCCGCATCG CCGTGGTCGA CCTGCTGGCC
GGCACGGTGC GCGAGATGCC GCTCGTGGCC CGCGGGGCCT GA
 
Protein sequence
MSADALQDDQ WARQRVLLEE GNRVLRASSA LVVGCGGLGA GAIPALVASG VGRVVLLDDD 
VVELSNLNRQ TLFTHADLGA LKVERVVARM RELSPESRIE GEVRRLTAQD AEFVQGFDVV
LDCTDKVASR TAISTSCREA GVPWIWSAID GWQGVLSVFV PGGPQWEDAS AMREELPAPP
QILGATPAML GAWQAAEAVK LLTGQGRPLV GRIAVVDLLA GTVREMPLVA RGA