Gene Ksed_19780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19780 
Symbol 
ID8373482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2062165 
End bp2062824 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content74% 
IMG OID644992231 
Productpredicted flavoprotein 
Protein accessionYP_003149741 
Protein GI256825781 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID[TIGR03566] FMN reductase, MsuE subfamily 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0329903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0191485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACC TCGCCGTCGT GAGCGCAGGG CTGCGCTCCC CCTCATCCAC CCGCACGCTG 
GCCGACCGTC TCGCCGAGGC GAGCGAGCAA GCCCTGCCGG GTCCGGTCGA GACCACCGTG
GTGGAGGTGC GCGAGCACGC CCACGCGATC GCCGACGCGC TGCTCACCGG GTTCACCAGC
GACGACCTCG AGGCGGCGCT GACCGCCGTG CAAGAGGCCG ACGCCGTGAT CGTGGTGACC
CCCACCTTCC AGGCCTCCTA CGCGGGACTG TTCAAGTCCT TCGTGGACCT GGTGGCCCCC
AACACCCTGC GAGGGACCCC CGTGCTCCTG GCCGCCACCG GCGGCTCCGA GCGCCACTCG
CTGGTGGTCG AGCACGCCCT GCGGCCGCTG TTCTCCTACC TCGGAGCGGC CACCGTGCCC
ACCGGCGTCT ACGCCGCGAC CGCGGACTTC GGCGACGGCA CCCTCGCCCT GGACCGCCGC
ATCGACCGGG CCGCCTCCGA GCTCGCCGCC CTGACCGCCG GGCCCGGCTC CGGCCGGGGA
CTCAGCGCCG CGGCGAACGT CTCGGACGAC CCTCTGACCG AGGCCCGGCG CACGCTGGGC
CGGGCCAGCG GCAGCGACAT CGGGGACTTT GGCGACGTGC TGCGCTCCCT GGGCCAGTAG
 
Protein sequence
MTHLAVVSAG LRSPSSTRTL ADRLAEASEQ ALPGPVETTV VEVREHAHAI ADALLTGFTS 
DDLEAALTAV QEADAVIVVT PTFQASYAGL FKSFVDLVAP NTLRGTPVLL AATGGSERHS
LVVEHALRPL FSYLGAATVP TGVYAATADF GDGTLALDRR IDRAASELAA LTAGPGSGRG
LSAAANVSDD PLTEARRTLG RASGSDIGDF GDVLRSLGQ