| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_19710 |
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| Symbol | |
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| ID | 8373476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 2055895 |
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| End bp | 2057559 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644992225 |
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| Product | hydroxymethylpyrimidine synthase |
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| Protein accession | YP_003149735 |
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| Protein GI | 256825775 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.19694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00821817 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCGTGA CCGACGGGGA GGTGACCGTG CCGATGACGG CGATCAGCCA GCACGACTCC
CCGGACGGCA GCCCCAACGA GGACTTCGTC GTGTACCGCA CGATGGGGCC GGGGTCCGAC
CCGCAGGTGG GCCTGGAACC GGTGCGGCAG GCGTGGATCG AGGCGCGCGG CGACACCGCG
ACCCATGCCG GGCGGGAGCG TGACCTCGCC GACGACGGGC GCTCGGCCCT GCGGCGCGGG
GAGCCCTCGC AGGCGTGGCG GGGTCGGGTG CAGGAGCCGC GGCGCGCGCA GCCGGGCCGG
ACGGTGACGC AGCTGCACTA CGCCCGCCGG GGCGAGATCA CCCCCGAGAT GCGGTACGTG
GCCCTGCGCG AGGGCTGCGA GGTGGAGCTG GTGCGCTCGG AGGTGGCGGC GGGGCGCGCC
ATCATTCCGG CGAACGTGAA CCACCCCGAG TCCGAGCCGA TGGTCATCGG CCGGGCCTTC
CTCACCAAGG TGAACGCCAA CATCGGCAAC TCGGCCGTCA CCTCCTCGAT CGCCGAGGAG
GTGGAGAAGA TGTCCTGGGC CACCCGCTGG GGCGCCGACA CGGTGATGGA TCTCTCCACC
GGGGAGGACA TCCACACCAC GCGGGAGTGG ATCCTGCGCA ACTCCCCGGT GCCGATCGGC
ACGGTCCCCA TCTACCAGGC CCTGGAGAAG GTCGACGGCG TGGCCGAGGA GCTCACATGG
GAGGTCTTCC GCGACACGGT TGTCGAGCAG GCAGAGCAGG GCGTGGACTA CATGACCGTG
CACGCCGGGG TGCGGCGGCG GCACGTGCCT CTGACGGCCG GGCGTGTGAC CGGCATCGTC
TCCCGCGGCG GGTCGATCAT GGCCGGGTGG TGCATGGCCC ACCGCCGCGA GTCGTTCCTG
TACGAGCACT TCGACGAGCT GTGTGAGATC TTCGCCGCGC ACGACGTCGC CTTCTCGCTG
GGCGACGGGC TGCGGCCGGG GTCGCTGGCC GACGCGAACG ACGCCGCCCA GCTGGCCGAG
CTGCGCACCC TGGGCGAGCT GACGCAGCGG GCCTGGGAGC ACGACGTGCA GGTGATGGTG
GAGGGCCCCG GCCACGTGCC GCTGCACCTG GTCAAGGAGA ACGTGGACCT GGAGCAGGAG
TGGTGCCACG GGGCGCCCTT CTACACGCTG GGCCCGCTGG CCACCGACAT CGCGCCGGGC
TACGACCACA TCACCAGTGC CATCGGGGCG GCCCCCATCG CCCAACACGG CACGGCGATG
CTCTGCTACG TCACGCCGAA GGAGCACCTG GGCCTGCCGA ACCGGGACGA CGTGAAGACC
GGGGTGATCA CCTACAAGAT CGCCGCGCAC GCCGCGGACG TCGCCAAGGG CCACCCGCGG
GCCCGGGACT GGGACGACGC CATGAGTAAG GCGCGCTTCG AGTTCCGTTG GCACGACCAG
TTCGCGCTGG CGCTGGACCC GGTGACCGCG CAGGAGTTCC ACGACGAGAC GCTGCCGGCC
GAGCCGGCCA AGAACGCGCA GTTCTGCTCG ATGTGCGGGC CGAAGTTCTG CTCGATGCGG
ATCAGTCGTG ACATCAACGA GGCCTACGGC GGGCAGATGG CCGCCGAGGC GGGTGCCGCG
GCCGTCGGCG AGCCGGTGTT CGTCGAGTTG AGCACCAGGC CGTGA
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| Protein sequence | MTVTDGEVTV PMTAISQHDS PDGSPNEDFV VYRTMGPGSD PQVGLEPVRQ AWIEARGDTA
THAGRERDLA DDGRSALRRG EPSQAWRGRV QEPRRAQPGR TVTQLHYARR GEITPEMRYV
ALREGCEVEL VRSEVAAGRA IIPANVNHPE SEPMVIGRAF LTKVNANIGN SAVTSSIAEE
VEKMSWATRW GADTVMDLST GEDIHTTREW ILRNSPVPIG TVPIYQALEK VDGVAEELTW
EVFRDTVVEQ AEQGVDYMTV HAGVRRRHVP LTAGRVTGIV SRGGSIMAGW CMAHRRESFL
YEHFDELCEI FAAHDVAFSL GDGLRPGSLA DANDAAQLAE LRTLGELTQR AWEHDVQVMV
EGPGHVPLHL VKENVDLEQE WCHGAPFYTL GPLATDIAPG YDHITSAIGA APIAQHGTAM
LCYVTPKEHL GLPNRDDVKT GVITYKIAAH AADVAKGHPR ARDWDDAMSK ARFEFRWHDQ
FALALDPVTA QEFHDETLPA EPAKNAQFCS MCGPKFCSMR ISRDINEAYG GQMAAEAGAA
AVGEPVFVEL STRP
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