Gene Ksed_19400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19400 
Symbol 
ID8373445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2021914 
End bp2022402 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID644992195 
Producttwin arginine-targeting protein translocase TatB 
Protein accessionYP_003149705 
Protein GI256825745 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.572351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0156187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGT GCGCTCGGGC CGGTGGCACC GACGACCAGG ACGGGAGCAC GCAGGTGAAC 
ATCTTCGGGA TGTCGCAGTG GGAGCTGCTG CTGATCATGG TGGTGGTCCT GGTGATCATC
GGCCCCGACC GGCTTCCCGG TGCCGTGGAG AACGTCCGCC GCTGGATCCG TCAGGCGCGG
GACATGGCCA ACCAGGCCAA GGGGGACCTG CGCGAGCAGG TGGGCGACGA CATCGACCTC
GACTGGCGCA AGTGGGACCC GCGCCAGTAC AACCCCAAGC GCATCGTCCG CGAGGCGCTG
ATGGAGGACG TGGAGTCGCT CAACCCGTTC GCGCCGGACC CGGCCGACGA CACCCCCGCC
GGGGTGGAGG AGTCCGAGGC CGCCGTGGCA CCGTCCCGGC ACGCCCTCGA GGGTGCGGGG
CGCCGCTGGG GCAACCCGCA CGGTTACGAC CCGCTGGCCC CCACCCCCTT CGACACCGAC
GCCACCTGA
 
Protein sequence
MLPCARAGGT DDQDGSTQVN IFGMSQWELL LIMVVVLVII GPDRLPGAVE NVRRWIRQAR 
DMANQAKGDL REQVGDDIDL DWRKWDPRQY NPKRIVREAL MEDVESLNPF APDPADDTPA
GVEESEAAVA PSRHALEGAG RRWGNPHGYD PLAPTPFDTD AT