Gene Ksed_19380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19380 
Symbol 
ID8373443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2019910 
End bp2020680 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content74% 
IMG OID644992193 
Productpredicted membrane protein 
Protein accessionYP_003149703 
Protein GI256825743 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.259397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0169508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTG AGACCGACCC GGACGAGCGC GCCCAGCGCC TGCGCGAGCT GCGGGAGCGC 
CGCGACCGAC GCAAGGCGGT GGGCGGCGCC GCCGTCCGCA GCGGGACGCG CACCCCGGCG
CCGAAGCCGA CCGACCGCAC CGAGCCGGGC GGCGGCCTGG CCACCCCACA GGCGACCCGT
CGGCGCCTGC CCCGGCCGCG GGTGGACTCC GAGGCCTTCG GTCGCGCGAG CGAGTCCTTC
GCCCGGTTCA TGGGCACCCC GCAGTTCCTG CTGTGGATGA GCCTGTTCGT GGTGGTGTGG
CTGGGCTGGA ACACGTTCAT GCCCGAGAGT GCGCAGTTCG ACCCGCGGGC GCTGAACTAC
ACGCTGCTGA CGCTGATCCT CTCCCTGCAG GCCTCCTACG CCGCCCCGCT GATCCTGCTC
GCACAGAACC GGCAGGACGA CCGCGACCGC GTCAGCATCG AGCAGGACCG CGCCCGCGAC
GAGCGGAACC TGGCCGACAC CGAGTTCATC ACCCGCGAGG TGGCCTCGTT GCGGCTGACG
GTGGGCGAGA TGGCCAGCCG TGACTACGTG CGCTCCGAGC TGCGCGACCT GCTGACCGAC
CTGCTGGAGG AGCTGGACGA GCGCGAGGCC CGCCGCGCGG AGGACCCCGT CGACCCCGAC
CCCGCCCCGG ACACGGCGCA GGACGCAGCA CCCACCGAGG CCCCCACCTC CCCCCGGTGT
GGGGGTGCCA CCCGCAGTGG CACGTACGAT GGAGGGCATG CCCACTCCTG A
 
Protein sequence
MALETDPDER AQRLRELRER RDRRKAVGGA AVRSGTRTPA PKPTDRTEPG GGLATPQATR 
RRLPRPRVDS EAFGRASESF ARFMGTPQFL LWMSLFVVVW LGWNTFMPES AQFDPRALNY
TLLTLILSLQ ASYAAPLILL AQNRQDDRDR VSIEQDRARD ERNLADTEFI TREVASLRLT
VGEMASRDYV RSELRDLLTD LLEELDEREA RRAEDPVDPD PAPDTAQDAA PTEAPTSPRC
GGATRSGTYD GGHAHS