Gene Ksed_19370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19370 
Symbol 
ID8373442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2018598 
End bp2019920 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content72% 
IMG OID644992192 
ProductMg/Co/Ni transporter MgtE with CBS domain 
Protein accessionYP_003149702 
Protein GI256825742 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0503098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0197915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCAG CCCGTGTCTT CGTGTCCCGC CTCATCGGTC TCGGCGTGTT CGACCCCATC 
GGTGACCGGG TCGGGCAGGT CCGCGACGTG GTGGTCCAGC ACTCATCGGC CCGCCAGGTG
ACCCGCGTCA TCGGCCTGGT GCTGGAGGTG CCCGGGCGGC GCCGGGTCTT CCTGCCGATG
ACCCGCATCA CCTCCATCGA CGCCGGGCAG GTGATCACCA CCGGCTTGCT GAACATGCGC
CGCTTCGAGC GCCGCCCCCG CGAGGTGCTC GTGCAGTCCG AGCTCTTCGA CCGCCAGGTG
CACGTGCGCC TCGACGAGGA CGACGCCTTC GACGCGACGG TCGAGGACAT CGGCATCACC
CAGCAGCGCA ACCGGGACTG GCACGTCGCC AAGGTGTTCG TGCGCAAGGC CGACCCCACG
CAGCGCCGTC GCCTCAACCT CCGTCGACGG GGGGAGACCC TGGTGGTGGA CGTCGATGCG
GTGAGCGGCC TGCACACCGA GGACGCCCGG CAGGGGGCGG ACCGCCTCAT CGAGTCCTTC
GAGGAGCTGA AGCCCGCGGA CGTCGCCGAC GCCCTGCAGG AGCTCACCCC CAAGCGCCGT
CGCGAGGTGG CCGACGCCCT GCCGGACGAG AAGCTCGCCG ACGTGCTGGA GGAGCTGCCC
GAGGAAGACC GGGTCGCGAT CGTTGCGGAC CTGAGCACCG ACCGTGCCGC GGACGTGCTG
GAGGCCATGC AGCCCGACGA CGCCGCCGAC CTGCTGGGCG AGCTGCCCGA CGAGACCGCG
GCCGAGCTGC TGGGGGCGAT GGAGCCCGAG GAGGCCGAGC CGCTGCGCAC GCTGCTGACC
TACGGCGAGG ACACCGCGGG CGGCATGATG ACGACCGAGC CGGTGATCTT GGGCGCGGAC
GCCTCCATCG CCGAAGCCCT GGCCACCGTC CGCCGGGCGG AGCTCCACCC GGCCCTGGCC
GCGATGGTGT TCGTCTGCCG CTCCCCGCTG GAGGTCCCCA CCGGCAAGCT GCTGGGCGTG
GTGCACCTGC AGCGGATGCT GCGCGAGCCC CCGCACGAGT CGATCGGCGC CGTGGTGGAC
AGCGACATCG AGCCGCTCGA CGTGGACGCC AGCCTCGGTG AGGTGACGCG CTCGATGGCG
AACTACAACA TGATCTCGCT GCCCGTCGTG GACTCCGAGC GTCGGCTGCT CGGCGCGGTC
ACCGTGGACG ACGTGCTGGA CCACATCCTC CCGGACGACT GGCGCGAGGA CCGTGACGAA
GCGGCCCCGG ACGTGACCGC GGCCCTCAGC GTGCAGGACG AGGAGGCAGC CCATGGCGCT
TGA
 
Protein sequence
MSAARVFVSR LIGLGVFDPI GDRVGQVRDV VVQHSSARQV TRVIGLVLEV PGRRRVFLPM 
TRITSIDAGQ VITTGLLNMR RFERRPREVL VQSELFDRQV HVRLDEDDAF DATVEDIGIT
QQRNRDWHVA KVFVRKADPT QRRRLNLRRR GETLVVDVDA VSGLHTEDAR QGADRLIESF
EELKPADVAD ALQELTPKRR REVADALPDE KLADVLEELP EEDRVAIVAD LSTDRAADVL
EAMQPDDAAD LLGELPDETA AELLGAMEPE EAEPLRTLLT YGEDTAGGMM TTEPVILGAD
ASIAEALATV RRAELHPALA AMVFVCRSPL EVPTGKLLGV VHLQRMLREP PHESIGAVVD
SDIEPLDVDA SLGEVTRSMA NYNMISLPVV DSERRLLGAV TVDDVLDHIL PDDWREDRDE
AAPDVTAALS VQDEEAAHGA