Gene Ksed_19250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19250 
Symbol 
ID8373430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2006798 
End bp2008327 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content71% 
IMG OID644992180 
Producthypothetical protein 
Protein accessionYP_003149690 
Protein GI256825730 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0275947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00598211 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGTCG CCGGAACCCA GCCGCTGCAG GCCAGTTCGG TGGCCACCGG ACGGGACGAG 
ACGTTCGTCC TGGCCCCCGG GGTGCAGGAG CAACTCACGC CCGGCACCAT CCAGGGCGGC
ACCCGCCGCC GGGCCATCCG CCTCGCGGAC GTCGTGCGGC CCACGAAGAC CTCGGCGAGC
CCCCTGGTGG ACTCCGGCGA CCGGGACCTC GACGAACGGC GCGGTCGTCA CGTCATCGAC
CTCGCGCTGC GCACCGGGGA GGCTCTGCTC GCGGCCGGCA CCCCGGCGGC CGACGTGGTG
GCCACCCTGC TGCGCCTGAC CAGCGCCTTC GGGGTCCGCT CGGCGCACGT GGACATCACG
TTCACCTCGA TCACCGTCAG CATCCACCGC GGCATGGGCG AGGACCCCCT GTCGGTGATG
CGCGTGGTGC GCGCCCGCAC GGCGGACTAC ATGGTCGTCG AGCGGCTCCA GGCCTTCGTC
AACAGCCTGG CCCGGACCCC CGGCGACCTC GATGCGGCCT CGGCCCGCCT GGAGGAGATC
CTCCATGCGC CGCGCGCCTA CCGGCCGTGG GTGGCCAGCG TCTCGTTGGC GATGATGGGA
GCGGCCATCT CCGCCCTGCT CGGCGCGGAG TGGGTCACCT GGATCCTCAC CTTCTTCTCG
GCCCTGTTCA TCGACCAGAC CCTCTCCCGC CTCGGCCGGT GGGGTCTGCC GCCCTTCTTC
GGCCAGGTCG TGGCGGCCAT GATCCCCACG AGCATTGCGG TGGCCATCTA CGCCATCGAG
AAGTACCAAC CGACCCTCGG CGGAATCCCG CTTGACCCGC CGGGCGACCA GTACCACTCG
CTCATCGTGG CCGCGGGCAT CATCGTGCTG CTGGCCGGCC TGGGCGTGGT CGGTACCGCG
CAGGACGCGT TGGACGGCTA CTACGTGACC GCCGGGGCGC GCGCCTTCGA GGTGGTGATG
ATGACCGGCG GCGTGGCGAT CGGGGTCTCG CTGGTCCTGT CCGCCGCCCG CCGGGCCGGC
CTGAGCATGA CCATCCTGAA CCGGCCCTAC CTTTCGGAGG ACCTGAGCAC CCTGGTGCTC
AGCTCGGCGG TGTTCTGCTT CTTCTCTGCG ATCGCCACCT ACGCCTCGAT GCGGGCGGCC
GTCCTGTCCT CGATGCTGGG CGCCACCGCC TTCGCCGTGT ACTGGGTGGT GGACGCCGGC
GGGCTGACCT ACGAGATGCG CATCCTGGTG GCGGTGGCGT TCGTGTCCTT CCTGGCGCAG
TGGGCCGCCC GCGTGCTGCA CGTCCCCTCG CTGGCGCTGA CCACTGCGGT GATCGCGCCC
TTCCTGCCCG GTGGCATGGT CTACCGAGGC CTCTTCCAGC TCATGGACAA CGACCCGGCC
ACCTACACCT CGGGTCTGCA GCAGATCTTC TCGGCCGTGG CCAGCGGTCT GGCCCTGGCG
GCCGGCGTCA GCCTCGGCAC CTGGCTCTAC CGGGCCCTGA ACGGCATGAG CCGGTCGGAG
CGCAAGGCCA GCCGGGTGGT GGAGACGTGA
 
Protein sequence
MTVAGTQPLQ ASSVATGRDE TFVLAPGVQE QLTPGTIQGG TRRRAIRLAD VVRPTKTSAS 
PLVDSGDRDL DERRGRHVID LALRTGEALL AAGTPAADVV ATLLRLTSAF GVRSAHVDIT
FTSITVSIHR GMGEDPLSVM RVVRARTADY MVVERLQAFV NSLARTPGDL DAASARLEEI
LHAPRAYRPW VASVSLAMMG AAISALLGAE WVTWILTFFS ALFIDQTLSR LGRWGLPPFF
GQVVAAMIPT SIAVAIYAIE KYQPTLGGIP LDPPGDQYHS LIVAAGIIVL LAGLGVVGTA
QDALDGYYVT AGARAFEVVM MTGGVAIGVS LVLSAARRAG LSMTILNRPY LSEDLSTLVL
SSAVFCFFSA IATYASMRAA VLSSMLGATA FAVYWVVDAG GLTYEMRILV AVAFVSFLAQ
WAARVLHVPS LALTTAVIAP FLPGGMVYRG LFQLMDNDPA TYTSGLQQIF SAVASGLALA
AGVSLGTWLY RALNGMSRSE RKASRVVET