Gene Ksed_19170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19170 
Symbol 
ID8373422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1992921 
End bp1994843 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content71% 
IMG OID644992172 
ProductNhaP-type Na+(K+)/H+ antiporter 
Protein accessionYP_003149682 
Protein GI256825722 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.490991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0684118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGG CGCCCTACCT CGCCCTCGTC GTGGCCCTGT CCGTGGCCTG CCAATGGGTC 
GCCTGGAGGT GGAAGGTCCC CTCCCTGCTG CTGCTGCTGG TCATCGGGTT CGGCCTGGGG
CGGGTCGTCG TGCCCGACGA GGTGCTCGGG CAGTCGATGC TGTTCAGCCT CGTGCAGCTG
GCGGTCGGCA TCATCCTGTT CGAGGGGGCG CTGGGGTTGC GCTTCCGGCA GGTGCGGGAC
CTGGGCAGAC CCATCCTGCG CCTGTGCACG TGGACGGTGC TGGTCACCTG GGTGCTGGTC
ACGCTCATGG CCTGGGCGCT GGGCTTCGAC ATCCGCGCGG CGCTGCTGGT CGGCGCGATC
CTGACGGTCA CCGGACCCAC CGTCATCAAC CCCATCCTGC GCACCCTGCG CCCCACCCGC
CGCGTCTCCC AGCTGCTGCG CTGGGAGGGA ATCGTGGTGG ACCCCATCGG CGCCATCCTC
GCCGTGCTGG TGCTGCAGGT GGTCACCGCC GCGGGGCGCA CCGGTCCGTT CCTGGACGCC
GTGCTCACCC TCTCCCGCGC GGTGGGCATC GCGGTGCTGA TCTCCGCGGT CTCGGCCTGG
CTGCTGACCT GGATGATGAA GCAGGACCTG ATCCCCGACT ACCTGCAGGG CGTCACCTTC
CTAGCCGTCG CCCTGGGCGG CATGACCGCC AGCAACTACG TGCAGGCCGA GTCCGGGCTG
CTGACCGTGA CCCTGCTGGG CATCCTGCTG GCCAACCAGC CGGACCTGCA CATCAACCAC
ATCATCGAGT TCAAGGAACA CCTGCAGGTG TTGTTCGTCG GCGCCCTGTT CGTGGTCCTC
GCCGGGCGGG TGGAGCCCGC GGCGCTGGTG GACGTGGCCC CCGTGGCCTT CGTGTTCATC
CTGGGGCTGG TGGTCATCCG GGTGGTGGCG ATCGCCATCG GCCTGTACGG CACCGAGGTC
ACCCGCGAGG AGAAGACGCT GATGATGTTG ATGGCGCCGC GCGGCATCGT GGCGGCGGCC
ATCACCTCGA TCTTCGCCCT GGAGTTCAGC CACGCCGCAG ACAACGCGAT CTCGGTGGGT
GAGCAGGCCC GGGCCGACGG CGACCACGCG CAGGCAGCCA CGCTGTTCGA GCGCGCCAGC
GACCTCTACG CCCTCTCCAC CCAGGTGGAC ACCCTGGTGC CGCTGGTCTT CCTGGTGATC
GTCTGCACCG TGGCGCTCTA CGGCCTGGGG GTGGGCCGGC TGGCCGAGCG GCTGGGCCTA
GCCACCACCA GCCCCCGCGG GGTGCTCTTC TCCGGCACCG GCCCGTGGGT GGTGCCGGCC
GCCAAGCGGT TGCGCGAGCT CGGCGTGCCC ACCCTCATCG TGGCCCGCGA GCGCGGCGAC
CTGCGCCAGG CCCGCATGTC CGGGCTGCGC ACCGAGGCCG CCTCGATCAT CAGCGAGTAC
GCGGTGGAGG ACATGGACCT CGCCGGCATC AAGTCGATGG TGTGCGCCAC GCGAGACGAC
GGCACCAACG CCATCGCCGC CTCGGAGTTC GGGCACGTGC TGGGCCGGCA GAACGTGTTC
AGCCTCAAGC GCGACGAGGA GCAGAACCAC GCGCGGCGCG CGACCGCGGG CCACCTCATC
GGGAACATCG CCTTCTCACC GCCCACCGAC TACGACGGGC TGCTGCAGCG CAGCCGCAAC
GGGCACCGGG TCTCCTCGGT GCCGCTCACC GAGGAGTTCA CCTCCACGGA CTTCTGGGCC
GAGCACCCCG AGGCGGTGGT GCTGTTCGTG CACAACGAGT CCACCACCCG CGTGGCCTCG
GGCAAGCAGG AGGAGGGCGA GCCGGGCGAC ACCTTCGTGG CCCTGCTGCC GGTCGACGAC
GGCACCCCGC TCGCGCGCGG GGCGACCATC GACGCGACGG GCTCCGCGAG CAGTGGACGC
TGA
 
Protein sequence
MEPAPYLALV VALSVACQWV AWRWKVPSLL LLLVIGFGLG RVVVPDEVLG QSMLFSLVQL 
AVGIILFEGA LGLRFRQVRD LGRPILRLCT WTVLVTWVLV TLMAWALGFD IRAALLVGAI
LTVTGPTVIN PILRTLRPTR RVSQLLRWEG IVVDPIGAIL AVLVLQVVTA AGRTGPFLDA
VLTLSRAVGI AVLISAVSAW LLTWMMKQDL IPDYLQGVTF LAVALGGMTA SNYVQAESGL
LTVTLLGILL ANQPDLHINH IIEFKEHLQV LFVGALFVVL AGRVEPAALV DVAPVAFVFI
LGLVVIRVVA IAIGLYGTEV TREEKTLMML MAPRGIVAAA ITSIFALEFS HAADNAISVG
EQARADGDHA QAATLFERAS DLYALSTQVD TLVPLVFLVI VCTVALYGLG VGRLAERLGL
ATTSPRGVLF SGTGPWVVPA AKRLRELGVP TLIVARERGD LRQARMSGLR TEAASIISEY
AVEDMDLAGI KSMVCATRDD GTNAIAASEF GHVLGRQNVF SLKRDEEQNH ARRATAGHLI
GNIAFSPPTD YDGLLQRSRN GHRVSSVPLT EEFTSTDFWA EHPEAVVLFV HNESTTRVAS
GKQEEGEPGD TFVALLPVDD GTPLARGATI DATGSASSGR