Gene Ksed_19160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19160 
Symbol 
ID8373421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1991884 
End bp1992792 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content73% 
IMG OID644992171 
ProductZn-finger containing NTP pyrophosphohydrolase 
Protein accessionYP_003149681 
Protein GI256825721 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.188624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGGTC GTCCGGGGTG GCACCGTGAC GGGGCTCACC ACCGGCTGTG GGTGACCGCT 
GGCGGGTCGG TGGCGATGGT GGGCGAGGAC TCGCCGCGTG TGCTGTGGCA GCACGCCCCG
GCCGGATCGC TGGCGGCCGA CCTCGATGAG GACGGCGCCC CCGACGGCGT GGAGGTCTTC
CTGGGGCAGG GTGCCCGCGG CCCGTTGGTG GCCGTGGTCG TGCCCGATGA GGAGTCGCTC
ACCCTGCCGG AGGGGGCCGC CTGGCAGGAC CTCAAGGTGG TGGGCACCGG GTTGTCGGAG
GACGACCGCC AGGCCGCGAT GACGGCGGTG GCGCTGGCCC GCTGGCACCA GCGACACCGC
TACTCGCCGA CCACCGGCGA GGAGACCGAG GTGGTCGCCA GCGGCTGGGT GCGCCGGGAC
TCCAGCGGGC AGCTGCACTT CCCGCGCACG GACACCGCGG TGATCATGGC GGTGGTGGAC
GACCGGGACC GCCTGCTGCT GGCACGGGGG AGCACCTGGC CGCAGGGGAG GTTGTCGGTG
CTGGCTGGTT TCGTGGAACC CGGCGAGACG CTGGAGGAGG CGGTCGCCCG GGAGGTGTAC
GAGGAGGTGA GCGTCGAGGT GGCGGACGTG CGGTACTTCG GCTCGCAGCC GTGGCCGTTC
CCCGCATCGT TGATGGTGGG GTTCACGGCG CAGGCCGGTG CCCAGCCCGA CACGATCGAG
CCGATGGCGC TGGAGCGCGA CGAGATCGCC CAGGCCCGCT GGTTCTCCCG GCAGGAGCTC
GCCGAGGCGC TGACGGCCCG CGAGGTGGGT CTTCCCGGGC CGTTCTCCAT CGCGCGGCGG
TTGATCGAGC ACTGGTATGG CGGTCCGTTG CCGGTGGCGC AGGAGCTGCG GGGGTCCGTG
CGTGGCTGA
 
Protein sequence
MDGRPGWHRD GAHHRLWVTA GGSVAMVGED SPRVLWQHAP AGSLAADLDE DGAPDGVEVF 
LGQGARGPLV AVVVPDEESL TLPEGAAWQD LKVVGTGLSE DDRQAAMTAV ALARWHQRHR
YSPTTGEETE VVASGWVRRD SSGQLHFPRT DTAVIMAVVD DRDRLLLARG STWPQGRLSV
LAGFVEPGET LEEAVAREVY EEVSVEVADV RYFGSQPWPF PASLMVGFTA QAGAQPDTIE
PMALERDEIA QARWFSRQEL AEALTAREVG LPGPFSIARR LIEHWYGGPL PVAQELRGSV
RG