Gene Ksed_19060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19060 
Symbol 
ID8373411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1979566 
End bp1982703 
Gene Length3138 bp 
Protein Length1045 aa 
Translation table11 
GC content71% 
IMG OID644992161 
Producthypothetical protein 
Protein accessionYP_003149671 
Protein GI256825711 
COG category[S] Function unknown 
COG ID[COG1615] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.569882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.89532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCAC CCCTGCCCCG CCCGCGCACC GGAGCCGGGA GGATCGCGCT GGTCGTGGCC 
GGCCTGATGG TGCTGACCGT CGTGGCCACC TTCCTGTCCA CGGTCTGGAC GGACGTGCTG
TGGTACCGCT CGGTGGACCA CCAGGGTGTG TACCTGCGCG TGGTGCTGTG GGCCACGGGT
CTCTTCGTGC TGGGCTTCGC CGTCACCTGG GCGCTGGTCG CCGGGGCGCT GTGGGCGGCC
TACCGCTACC GGCCCACGCG CGACCCGCGC ATGGCGGCCT ACGACCCGCT GGAGAAGTAC
CGCGAGCAGG CCGCCGGGTC GCGCCGGCTC ATCCAGCTCG GCGCCCCCGC CATCACCGGC
CTGTTCATGG GCCTGGCCCT CTCCAGCGCG TGGCGGCAGG CGATGCTGTG GTGGAACCGC
CAGCCCTTCG GCGAGACCGA TCCGCAGTTC GGCCACGACA TCGGCTTCTA CGTGTTCACC
GTGCCCTTCC TGTCGGTGCT CGTCGACGTC TTGCTCGCCG CGCTGGTGAT CGCACTGGTG
GTCAACCTGG CCACGCACTA CCTCTCGGGG GCGCTCTCGG TGCGTCCGCT GCATGGCGGC
CGCCACGTCA CTCAGCCCGC CGCCTGGCAG ATCGGCGGTC TGACGGCGGC CGCGCTGCTG
GTCAAGGCGC TGGACTTCCT GGTGCAGCGC TGGGAGATGA CCACCGTCAT GGGCGGGCGC
ACCGCGGGGC CGGGGTACAC CGACGTGCAC GCCCGCATCC CGATGCTGGC GATCCTCGCG
CTGACCACCG TCGTGGTCGC GCTCGTGGTG TTGTGGGCCG CGCGCGAGCG CAGCTGGAAG
CTCCCGGTGG CCAGCGTGGC CCTGCTGGTC GCGAGCTCGC TGGTGGGCTT GAACCTCTAC
CCGGCCCTGC TGCAGCGCTT CTTCGTCGTC CCCTCGGAGG CCAGCCGCGA GGCGCCTTTC
ATCCAGCGCG GCATCGACGC CACCCGGGCG GCCTACGGCA TCGACGACGT GGAGGTCATC
CCCTACGACG CCCGCACCGC CGCCACCCCG AGCGTCCTGG CCGAGGACCG CAAGTCCATC
CCCGGCATCC GCCTCATGGA CCCCTCGGTC ATCAGCCCGA CGGTCAAGCA GCTGCAGGGA
ATCCGCAACT ACTACCAGTT CCCGGACACG CTCGACGTGG ACCGCTACGA GGTGGACGGT
GCCCAGGAGG AGCACGTGGT GGCCGTCCGA GAGCTCGACC TGGACGGCAT CTCCGCCTCG
CAGCGCAACT GGGTGAACGA TCACACGGTC TACACGCACG GTTTCGGCAT GGTGGCGCTG
GACTCCTCGG AGAAGTCCTC CAAGGGTGAG CCGGTGTTCA CCGAGCGCAA CATCCCGCCG
ACGCAGCAGC TGGGCCCGGG GGAGTACGAG CCGCGCGTGT ACTTCGGGGA GTTCTCGCCG
GTGTACTCGA TCGTCGGCGC ACCGGACGAT GCGGAGCCGC GCGAGCTCGA CCGCCCGGAC
GGCTCGGAGA CCGGCCAGGC CAACACCACC TACCAGGGCG CCGGTGGCGT GCCGGTGGGC
AACTGGATCA ACCGGTTCGC GTACGCGGTG AAGTACCGCG AGGGCAACTT CCTGCTGGCG
GACGCGTTCA ACAGCGAGTC TCGCCTGCTG GACCACCGCA CGCCGCGCGA GCGCGTGGAG
CGCGTGGCCC CCTGGCTGAC CCTCGATGGG GACGCCTTCC CCTCCGTGGT CGACGGCCGC
ATCGTGTGGA TCGTGGACGG GTACACGACC TCCTCGCGCT ACCCCTACTC GGAGACGACG
AACCTGGAGC AGGCGACGGC GGACGGCACC ACCGCATCGA GTGCGAACGT GGCCAACGCC
AGCGGGCGGG TGAACTACCT GCGCAACTCG GTGAAGGCCA CCGTGGATGC CTACGACGGT
TCGGTCACCC TGTACGCGTG GGACGAGGAG GACCCGATGC TGAAGGCCTG GCAGCAGGCC
TTCCCGGACA CGGTGAAGCC GCGGGCGGAG ATCGGCGAGG AGCTGATGAG CCACCTGCGC
TACCCGCAGG ACCTGTTCAA GGCCCAGCGA GAGATGCTGC AGCGCTACCA CGTGACCACG
CCCGGGGCCT TCTTCGGTGG GCAGGACTTC TGGCGCGTGC CGCCGGACCC GACGCAGGAC
AACGAGGCCG TGGTGCAGCC GCCGTACTAC CTGGGCGTGC AGATGCCCGG GCAGGAGGAG
CCGCGCTTCA GCCTGACCAG CACCTTCAAG CCGGTGGGTG AGCGCGAGGT CCTCTCGGGC
TTCCTCGCCG TGGATGCCGA TGCGGGGGCC GATGCGGGGG CGCCCCGTGA CGGGTACGGC
GAGCTGCGGG TGCTGGAGCT CCCGCGCGAG ACCTCCGTGC CCGGACCGGG CCAGGTGCAG
AACGACCTGG AGTCGTCGAA CAACTCGTCG CCGGACTTCT CGCAGACGTT GTCGCAGTTC
CTGTCGCTGA ACCAGCAGCG CGGGTCGGAC GTCCAGTTCG GCAACCAGCT GACGCTGCCG
GTGGGCGGGG GCGTGCTGTA CGTGGAGCCG ATCTACGTGC AGTCCACCTC GGACTCCAGC
TACCCGCTGC TGCGCCTGGT GGTCGTGGCC TTCGGCAACG ACCTGGCCTG GGGCGACACC
CTGGACTCGG CGCTGTCGCA GCTGTTCTCC GGTGAGGACG GCGAGGGCGA CGGTTCCGGT
GAGGACGGCG AGGGCGACGG TTCCGGTGAG GACGGCGAGG GCGATGGCCA GGGCGATGGT
TCCGGTGATG GCCAGGGTGA GCAGCCCGGC ACGCCCGACG AGGCTGCGCT GAACGCCGCC
CTGGAGGACG CGCGCGCCGC CATGCAGGCA GCCGACCAGG CGCTGCAGGA CGGCGACTTC
GCCGCCTACG GTGACGCCCA GGAGGAGCTG CGCGACGCCA TCCGCCGGGC CACCGAGGCC
GCGCCGGAGG GCGGCAGTGC CAACCTCGGG CCGGAGGACC CGGCCAGTGA GGGGCAGGGC
GAGGGCTCCG ACCAGCAGGC ACCCGACCCG GCCGAGGGCG AGGGCTCCGA CCAGCAGGCG
CCCGACCCGG CCGAGGGCGA GGGCTCCGAC CAGCAGGCGC CCGACCCGGC CGAGGGCGAG
GAGACCCCCA CCGAGTGA
 
Protein sequence
MAPPLPRPRT GAGRIALVVA GLMVLTVVAT FLSTVWTDVL WYRSVDHQGV YLRVVLWATG 
LFVLGFAVTW ALVAGALWAA YRYRPTRDPR MAAYDPLEKY REQAAGSRRL IQLGAPAITG
LFMGLALSSA WRQAMLWWNR QPFGETDPQF GHDIGFYVFT VPFLSVLVDV LLAALVIALV
VNLATHYLSG ALSVRPLHGG RHVTQPAAWQ IGGLTAAALL VKALDFLVQR WEMTTVMGGR
TAGPGYTDVH ARIPMLAILA LTTVVVALVV LWAARERSWK LPVASVALLV ASSLVGLNLY
PALLQRFFVV PSEASREAPF IQRGIDATRA AYGIDDVEVI PYDARTAATP SVLAEDRKSI
PGIRLMDPSV ISPTVKQLQG IRNYYQFPDT LDVDRYEVDG AQEEHVVAVR ELDLDGISAS
QRNWVNDHTV YTHGFGMVAL DSSEKSSKGE PVFTERNIPP TQQLGPGEYE PRVYFGEFSP
VYSIVGAPDD AEPRELDRPD GSETGQANTT YQGAGGVPVG NWINRFAYAV KYREGNFLLA
DAFNSESRLL DHRTPRERVE RVAPWLTLDG DAFPSVVDGR IVWIVDGYTT SSRYPYSETT
NLEQATADGT TASSANVANA SGRVNYLRNS VKATVDAYDG SVTLYAWDEE DPMLKAWQQA
FPDTVKPRAE IGEELMSHLR YPQDLFKAQR EMLQRYHVTT PGAFFGGQDF WRVPPDPTQD
NEAVVQPPYY LGVQMPGQEE PRFSLTSTFK PVGEREVLSG FLAVDADAGA DAGAPRDGYG
ELRVLELPRE TSVPGPGQVQ NDLESSNNSS PDFSQTLSQF LSLNQQRGSD VQFGNQLTLP
VGGGVLYVEP IYVQSTSDSS YPLLRLVVVA FGNDLAWGDT LDSALSQLFS GEDGEGDGSG
EDGEGDGSGE DGEGDGQGDG SGDGQGEQPG TPDEAALNAA LEDARAAMQA ADQALQDGDF
AAYGDAQEEL RDAIRRATEA APEGGSANLG PEDPASEGQG EGSDQQAPDP AEGEGSDQQA
PDPAEGEGSD QQAPDPAEGE ETPTE